pub struct MultiGzDecoder<R>(_);
Expand description

A gzip streaming decoder that decodes all members of a multistream

A gzip member consists of a header, compressed data and a trailer. The gzip specification, however, allows multiple gzip members to be joined in a single stream. MultiGzDecoder will decode all consecutive members while GzDecoder will only decompress the first gzip member. The multistream format is commonly used in bioinformatics, for example when using the BGZF compressed data.

This structure exposes a BufRead interface that will consume all gzip members from the underlying reader and emit uncompressed data.

Examples

use std::io::prelude::*;
use std::io;
use flate2::bufread::MultiGzDecoder;

// Uncompresses a Gz Encoded vector of bytes and returns a string or error
// Here &[u8] implements BufRead

fn decode_reader(bytes: Vec<u8>) -> io::Result<String> {
   let mut gz = MultiGzDecoder::new(&bytes[..]);
   let mut s = String::new();
   gz.read_to_string(&mut s)?;
   Ok(s)
}

Implementations§

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impl<R: BufRead> MultiGzDecoder<R>

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pub fn new(r: R) -> MultiGzDecoder<R>

Creates a new decoder from the given reader, immediately parsing the (first) gzip header. If the gzip stream contains multiple members all will be decoded.

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impl<R> MultiGzDecoder<R>

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pub fn header(&self) -> Option<&GzHeader>

Returns the current header associated with this stream, if it’s valid

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pub fn get_ref(&self) -> &R

Acquires a reference to the underlying reader.

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pub fn get_mut(&mut self) -> &mut R

Acquires a mutable reference to the underlying stream.

Note that mutation of the stream may result in surprising results if this encoder is continued to be used.

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pub fn into_inner(self) -> R

Consumes this decoder, returning the underlying reader.

Trait Implementations§

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impl<R: Debug> Debug for MultiGzDecoder<R>

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fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter. Read more
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impl<R: BufRead> Read for MultiGzDecoder<R>

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fn read(&mut self, into: &mut [u8]) -> Result<usize>

Pull some bytes from this source into the specified buffer, returning how many bytes were read. Read more
1.36.0 · source§

fn read_vectored(&mut self, bufs: &mut [IoSliceMut<'_>]) -> Result<usize, Error>

Like read, except that it reads into a slice of buffers. Read more
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fn is_read_vectored(&self) -> bool

🔬This is a nightly-only experimental API. (can_vector)
Determines if this Reader has an efficient read_vectored implementation. Read more
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fn read_to_end(&mut self, buf: &mut Vec<u8, Global>) -> Result<usize, Error>

Read all bytes until EOF in this source, placing them into buf. Read more
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fn read_to_string(&mut self, buf: &mut String) -> Result<usize, Error>

Read all bytes until EOF in this source, appending them to buf. Read more
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fn read_exact(&mut self, buf: &mut [u8]) -> Result<(), Error>

Read the exact number of bytes required to fill buf. Read more
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fn read_buf(&mut self, buf: BorrowedCursor<'_>) -> Result<(), Error>

🔬This is a nightly-only experimental API. (read_buf)
Pull some bytes from this source into the specified buffer. Read more
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fn read_buf_exact(&mut self, cursor: BorrowedCursor<'_>) -> Result<(), Error>

🔬This is a nightly-only experimental API. (read_buf)
Read the exact number of bytes required to fill cursor. Read more
1.0.0 · source§

fn by_ref(&mut self) -> &mut Selfwhere Self: Sized,

Creates a “by reference” adaptor for this instance of Read. Read more
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fn bytes(self) -> Bytes<Self>where Self: Sized,

Transforms this Read instance to an Iterator over its bytes. Read more
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fn chain<R>(self, next: R) -> Chain<Self, R>where R: Read, Self: Sized,

Creates an adapter which will chain this stream with another. Read more
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fn take(self, limit: u64) -> Take<Self>where Self: Sized,

Creates an adapter which will read at most limit bytes from it. Read more

Auto Trait Implementations§

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impl<R> !RefUnwindSafe for MultiGzDecoder<R>

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impl<R> Send for MultiGzDecoder<R>where R: Send,

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impl<R> Sync for MultiGzDecoder<R>where R: Sync,

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impl<R> Unpin for MultiGzDecoder<R>where R: Unpin,

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impl<R> !UnwindSafe for MultiGzDecoder<R>

Blanket Implementations§

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impl<T> Any for Twhere T: 'static + ?Sized,

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fn type_id(&self) -> TypeId

Gets the TypeId of self. Read more
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impl<T> Borrow<T> for Twhere T: ?Sized,

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fn borrow(&self) -> &T

Immutably borrows from an owned value. Read more
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impl<T> BorrowMut<T> for Twhere T: ?Sized,

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fn borrow_mut(&mut self) -> &mut T

Mutably borrows from an owned value. Read more
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impl<T> From<T> for T

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fn from(t: T) -> T

Returns the argument unchanged.

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impl<T, U> Into<U> for Twhere U: From<T>,

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fn into(self) -> U

Calls U::from(self).

That is, this conversion is whatever the implementation of From<T> for U chooses to do.

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impl<T, U> TryFrom<U> for Twhere U: Into<T>,

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type Error = Infallible

The type returned in the event of a conversion error.
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fn try_from(value: U) -> Result<T, <T as TryFrom<U>>::Error>

Performs the conversion.
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impl<T, U> TryInto<U> for Twhere U: TryFrom<T>,

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type Error = <U as TryFrom<T>>::Error

The type returned in the event of a conversion error.
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fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>

Performs the conversion.