Crate fibertools_rs

Modules

• bamlift
• bamranges
• basemods
  Add and remove base modifications from a bam record
• bio_io
• center
  Center fiberseq information around a reference position
• cli
  Command line interface for fibertools-rs.
• decorator
  add decorators
• extract
  Extract fiberseq data into plain text formats
• fiber
  Data structure for fiberseq data
• fire
  add fire data
• footprint
• m6a_burn
• nucleosomes
  Add nucleosomes to a bam file
• predict_m6a
  m6A prediction
• strip_basemods
  Remove base modifications from a bam record

Constants

• CPG_COLOR
• FIRE_COLORS
• GIT_HASH
• LINKER_COLOR
• LONG_VERSION
• M6A_COLOR
• NUC_COLOR
  COLORS
• VERSION

Functions

• bam_writer
  Write to a bam file.
• clear_kinetics
  clear kinetics from a hifi bam
• join_by_str
  join a vector with commas
• join_by_str_option
  join a vector with commas
• join_by_str_option_can_skip
  join a vector with commas
• unzip_to_vectors
  unzip a vector of tuples