Module reader 

Streaming FASTA/FASTQ reader.

Structs

FastxReader

A streaming reader for FASTA and FASTQ.

ReaderBuilder

Configuration for a FastxReader.

Records

Borrowing iterator returned by FastxReader::records.

Constants

DEFAULT_BUFFER_SIZE

Default read buffer, large enough to hold a full 150 bp read set line and to keep syscall overhead negligible.

Functions

from_stdin

Read records from standard input (gzip is detected from the magic bytes).

open

Open a FASTA/FASTQ file, transparently handling gzip.

Type Aliases

BoxedReader

The boxed reader type produced by open and from_stdin.