Crate fastqc_rs 

Modules

analysis

charts

cli

config

contaminant

encoding

modules

report

sequence

statistics

utils

Structs

ChartImage

Rendered chart image stored in the FastQC archive.

FastQCReport

Result of running FastQC on a single file or sequence set.

FastQCRunner

Public API for running QC on in-memory sequences.

ModuleResult

Per-module QC result with structured data for programmatic access.

Constants

VERSION

Functions

create_modules

Create the standard module list, matching Java ModuleFactory.getStandardModuleList().

detect_format

Run FastQC analysis on a single file and return the data report text. Detect input format from config or file extension. Matches Java SequenceFactory logic.

run_fastqc

Run FastQC analysis on the given files with the provided configuration. Uses rayon thread pool when –threads > 1 for parallel file processing.

run_fastqc_on_file

Run FastQC analysis on a single file and return both reports.