List of all items
Structs
- atoms::Atom
- atoms::Atoms
- atoms::FilterElement
- atoms::FilterNone
- atoms::FilterTag
- atoms::GenericParticle
- atoms::PyAtoms
- bond_order::CutoffParameters
- distance::distance_vector::DistanceVector
- distance::distance_vector::DistanceVectorList
- distance::spatial_hash::SpatialHashPrecomputed
- distance::spherical_coordinates::RThetaPhi
- fourpointcorrelation::Correlation
- three_body_correlation::full_angular_correlation::CoordinateSystemHistogram
- util::LinearIterator
- util::LogIterator
- viscosity::Viscosity
- viscosity::ViscosityWithError
Enums
- atoms::Element
- atoms::FilterEnum
- atoms::PyFilterEnum
- distance::cutoff_mode::CutoffMode
- io::ReadCell
- io::ReadCellPython
- io::ReadError
- io::ReadIndex
- three_body_correlation::neighbour_selection::NeighbourSelectionCriteria
- util::TimeAxis
Traits
Functions
- atoms::convert_3d_array_to_matrices
- atoms::convert_array_to_matrix
- atoms::convert_multiple_atoms
- atoms::convert_multiple_positions
- atoms::convert_multiple_stress_arrays
- atoms::convert_multiple_stresses
- atoms::convert_multiple_velocities
- atoms::convert_positions
- atoms::convert_stress
- atoms::convert_velocities
- bond_order::acos
- bond_order::atan2
- bond_order::c_ij
- bond_order::legendre_plm
- bond_order::legendre_pmm
- bond_order::q_l
- bond_order::q_l_dot
- bond_order::q_l_dot_single
- bond_order::q_l_global
- bond_order::q_l_single
- bond_order::q_lm
- bond_order::q_lm_single
- bond_order::q_tetrahedral
- bond_order::q_tetrahedral_single
- bond_order::spherical_harmonic
- distance::distance_functions::distances
- distance::distance_functions::distances_single
- distance::distance_functions::pair_within_cutoff
- distance::distance_vector::distance_vector
- distance::distance_vector::distance_vector_non_orthorhombic
- distance::distance_vector::distance_vector_orthorhombic
- distance::distance_vector::distance_vector_without_inv
- distance::distance_vector::distance_vectors
- distance::distance_vector::distance_vectors_array
- distance::distance_vector::distance_vectors_array_cut
- distance::distance_vector::distance_vectors_array_cut_single
- distance::distance_vector::distance_vectors_array_single
- distance::distance_vector::distance_vectors_cut
- distance::spatial_hash::build_spatial_hash
- distance::spatial_hash::cell_key
- distance::spatial_hash::distance_vectors_cut_spatial_hash
- distance::spatial_hash::get_neighbour_key
- distance::spherical_coordinates::r_theta_phi_ij
- distance::spherical_coordinates::r_theta_phi_ij_single
- fourpointcorrelation::chi_4
- fourpointcorrelation::chi_4_self
- fourpointcorrelation::q
- fourpointcorrelation::q_distinct
- fourpointcorrelation::q_self
- fourpointcorrelation::q_self_atomic
- fourpointcorrelation::q_single
- fourpointcorrelation::q_single_distinct
- fourpointcorrelation::q_single_self
- fourpointcorrelation::w
- intermediatescattering::f_d
- intermediatescattering::f_s
- io::cp2k::read_cp2k_restart
- io::cp2k::read_cp2k_restart_async
- io::cp2k::read_cp2k_restart_from_string
- io::espresso_in::read_espresso_in
- io::espresso_in::read_espresso_in_async
- io::espresso_in::read_espresso_in_from_string
- io::espresso_in::write_espresso_in
- io::espresso_in::write_espresso_in_async
- io::espresso_out::read_espresso_out
- io::espresso_out::read_espresso_out_async
- io::espresso_out::read_espresso_out_from_string
- io::get_extension_from_filename
- io::read
- io::read_async
- io::read_cif
- io::read_cif_async
- io::read_cif_from_string
- io::read_cif_from_string_async
- io::read_pdb
- io::read_pdb_async
- io::read_pdb_from_string
- io::read_pdb_from_string_async
- io::read_traj
- io::read_traj_async
- io::read_traj_from_file
- io::read_traj_from_file_async
- io::read_xyz
- io::read_xyz_async
- io::read_xyz_from_string
- io::read_xyz_from_string_async
- io::write
- io::write_async
- io::write_cif
- io::write_cif_async
- io::write_cif_to_string
- io::write_pdb
- io::write_pdb_async
- io::write_pdb_to_string
- io::write_traj
- io::write_traj_async
- io::write_xyz
- io::write_xyz_async
- io::write_xyz_to_string
- meansquareddisplacement::alpha_2
- meansquareddisplacement::alpha_2_single
- meansquareddisplacement::msd_single
- meansquareddisplacement::sd_single
- neighbours::angles::bond_angle_distribution
- neighbours::bonds::find_bonds
- neighbours::bonds::find_bonds_array
- neighbours::bonds::find_bonds_base
- neighbours::bonds::find_bonds_base_spatial_hash
- neighbours::bonds::find_bonds_with_vec
- neighbours::bonds::find_bonds_with_vec_array
- neighbours::bonds::find_bonds_with_vec_spatial_hash
- neighbours::coordination::coordination_number_single
- neighbours::coordination::coordination_numbers
- neighbours::coordination::coordination_numbers_spatial_hash
- neighbours::nearest_neighbours::nearest_neighbours
- neighbours::nearest_neighbours::neighbour_list
- neighbours::nearest_neighbours::neighbour_lists
- neighbours::radial_distribution::radial_distribution_function
- neighbours::radial_distribution::radial_distribution_function_shells
- three_body_correlation::angular_correlations::angular_three_body_correlation
- three_body_correlation::angular_correlations::angular_three_body_triplets
- three_body_correlation::basic_correlations::altbc
- three_body_correlation::basic_correlations::tbc
- three_body_correlation::bond_length::bond_length_ratio
- three_body_correlation::bond_length::bond_length_ratio_list
- three_body_correlation::full_angular_correlation::full_angular_three_body_correlation
- three_body_correlation::full_angular_correlation::normalized_full_angular_three_body_correlation
- three_body_correlation::temporal_correlations::temporal_altbc
- three_body_correlation::temporal_correlations::temporal_angular_three_body_correlation
- three_body_correlation::temporal_correlations::temporal_tbc
- util::estimate_len_iter_log
- util::flatten_vecs
- util::flatten_vecs_to_array2
- util::iter_linear
- util::iter_log
- util::time_average
- util::time_average_par
- util::time_average_single_particle
- util::vec_to_array
- velocity_autocorrelation::acorr
- velocity_autocorrelation::vacf
- viscosity::average_viscosities
- viscosity::trapz_array
- viscosity::viscosity