Skip to main content

facett_plotters/
violin.rs

1//! **Violin plot** — a mirrored kernel-density silhouette per group. The KDE
2//! ([`kde`]) is a pure function (Gaussian kernel, Silverman bandwidth) sampled
3//! on an evenly-spaced grid; [`ViolinView`] paints the mirrored density as a
4//! filled polygon and overlays the median line.
5
6use egui::{Align2, FontId, Pos2, Rect, Sense, Stroke, Ui, vec2};
7use facett_core::clip::{ClipKind, ClipPayload, CopySource};
8use facett_core::{Elm, FacetCaps, Semantics, a11y_node, theme};
9use serde::{Deserialize, Serialize};
10
11use crate::boxplot::{Quartiles, paint_tooltip};
12
13/// One density curve: `grid[i]` (the value axis) carries density `dens[i]`.
14#[derive(Clone, Debug, PartialEq)]
15pub struct Density {
16    pub grid: Vec<f64>,
17    pub dens: Vec<f64>,
18    /// Peak density (for normalising the silhouette width).
19    pub peak: f64,
20}
21
22/// Silverman's rule-of-thumb bandwidth: `1.06 · σ · n^(−1/5)`. Falls back to a
23/// small positive width on a degenerate (zero-variance) sample so the kernel
24/// stays well-defined.
25pub fn silverman_bandwidth(values: &[f64]) -> f64 {
26    let n = values.len();
27    if n < 2 {
28        return 1.0;
29    }
30    let mean = values.iter().sum::<f64>() / n as f64;
31    let var = values.iter().map(|x| (x - mean).powi(2)).sum::<f64>() / (n as f64 - 1.0);
32    let sd = var.sqrt();
33    let bw = 1.06 * sd * (n as f64).powf(-0.2);
34    if bw > 0.0 { bw } else { 1.0 }
35}
36
37/// Gaussian-kernel density estimate of `values`, evaluated on `bins` evenly
38/// spaced points spanning `[min, max]` padded by one bandwidth. `None` for an
39/// empty sample.
40pub fn kde(values: &[f64], bins: usize) -> Option<Density> {
41    let v: Vec<f64> = values.iter().copied().filter(|x| x.is_finite()).collect();
42    if v.is_empty() {
43        return None;
44    }
45    let bins = bins.max(2);
46    let bw = silverman_bandwidth(&v);
47    let (mut lo, mut hi) = (v[0], v[0]);
48    for &x in &v {
49        lo = lo.min(x);
50        hi = hi.max(x);
51    }
52    // Pad so the tails of the kernel are visible.
53    lo -= bw;
54    hi += bw;
55    let span = (hi - lo).max(1e-9);
56    let inv = 1.0 / (bw * (std::f64::consts::TAU).sqrt());
57    let n = v.len() as f64;
58    let mut grid = Vec::with_capacity(bins);
59    let mut dens = Vec::with_capacity(bins);
60    let mut peak = 0.0_f64;
61    for i in 0..bins {
62        let x = lo + span * (i as f64) / (bins as f64 - 1.0);
63        let mut d = 0.0;
64        for &xi in &v {
65            let u = (x - xi) / bw;
66            d += (-0.5 * u * u).exp();
67        }
68        d *= inv / n;
69        peak = peak.max(d);
70        grid.push(x);
71        dens.push(d);
72    }
73    Some(Density { grid, dens, peak })
74}
75
76/// Persistent, observable interaction state (FC-3). The violin's hover readout
77/// tracks the cursor's exact position, so the stored hover carries both the
78/// group index (into `densities()`) and the value the cursor maps to.
79#[derive(Clone, Debug, Default, PartialEq, Serialize, Deserialize)]
80pub struct ViolinState {
81    /// `(group index, value-at-cursor)` for the hovered silhouette, or `None`.
82    pub hover: Option<(usize, f64)>,
83}
84
85/// FC-2 input surface. One input: the hovered silhouette / cursor value changing
86/// (hit-tested purely in [`ViolinView::render`], applied in [`ViolinView::update`]).
87#[derive(Clone, Debug, PartialEq)]
88pub enum ViolinMsg {
89    /// Set (or clear, with `None`) the hovered `(group, value-at-cursor)`.
90    Hover(Option<(usize, f64)>),
91}
92
93/// FC-8: the violin plot does no I/O.
94#[derive(Clone, Debug)]
95pub enum ViolinEffect {}
96
97/// A violin plot: named groups of raw samples.
98pub struct ViolinView {
99    pub title: String,
100    pub groups: Vec<(String, Vec<f64>)>,
101    /// KDE resolution (grid points per group).
102    pub bins: usize,
103    /// Observable interaction state (FC-3).
104    pub state: ViolinState,
105}
106
107impl ViolinView {
108    pub fn new(title: impl Into<String>, groups: Vec<(String, Vec<f64>)>) -> Self {
109        Self { title: title.into(), groups, bins: 64, state: ViolinState::default() }
110    }
111
112    /// FC-3: read the complete observable interaction state.
113    pub fn state(&self) -> &ViolinState {
114        &self.state
115    }
116
117    /// FC-2/FC-8: the single mutation path. Apply one [`ViolinMsg`]; no effects.
118    pub fn update(&mut self, msg: ViolinMsg) -> Vec<ViolinEffect> {
119        match msg {
120            ViolinMsg::Hover(h) => self.state.hover = h,
121        }
122        Vec::new()
123    }
124
125    fn densities(&self) -> Vec<(String, Density, f64)> {
126        self.groups
127            .iter()
128            .filter_map(|(name, vals)| {
129                let d = kde(vals, self.bins)?;
130                let median = Quartiles::compute(vals)?.median;
131                Some((name.clone(), d, median))
132            })
133            .collect()
134    }
135
136    fn value_range(&self, dens: &[(String, Density, f64)]) -> Option<(f64, f64)> {
137        let mut r: Option<(f64, f64)> = None;
138        for (_, d, _) in dens {
139            for &g in &d.grid {
140                r = Some(match r {
141                    None => (g, g),
142                    Some((lo, hi)) => (lo.min(g), hi.max(g)),
143                });
144            }
145        }
146        r
147    }
148
149    fn to_csv(&self) -> String {
150        let mut s = String::from("group,n,median,peak_density\n");
151        for (name, d, median) in self.densities() {
152            let n = self.groups.iter().find(|(g, _)| g == &name).map(|(_, v)| v.len()).unwrap_or(0);
153            s.push_str(&format!("{name},{n},{median},{}\n", d.peak));
154        }
155        s
156    }
157}
158
159// ── typed copy (§16) — the chart dataset as CSV Text ──────────────────
160impl CopySource for ViolinView {
161    fn copy_kinds(&self) -> &[ClipKind] {
162        &[ClipKind::Text]
163    }
164    fn copy_payload(&self) -> Option<ClipPayload> {
165        let csv = self.to_csv();
166        (!csv.is_empty()).then_some(ClipPayload::Text(csv))
167    }
168}
169
170impl ViolinView {
171    /// FC-9 pure view: paints the silhouettes + hover tooltip (from the *stored*
172    /// hover) and **returns** the hover change as a `Msg` — never mutates `self`.
173    fn render(&self, ui: &mut Ui) -> Vec<ViolinMsg> {
174        let th = theme(ui);
175        let dens = self.densities();
176        let (rect, resp) = ui.allocate_exact_size(ui.available_size(), Sense::hover());
177        let painter = ui.painter_at(rect);
178        painter.rect_filled(rect, egui::CornerRadius::ZERO, th.bg);
179        let Some((vmin, vmax)) = self.value_range(&dens) else {
180            // ── render-lane emit: this Facet::ui path RAN ─────────────────────────
181            #[cfg(feature = "testmatrix")]
182            facett_core::testmatrix::emit(
183                "facett-plotters::ViolinView::ui",
184                "ui_render",
185                dens.is_empty(),
186                &format!("drew=empty_hint groups={} densities={}", self.groups.len(), dens.len()),
187            );
188            painter.text(rect.center(), Align2::CENTER_CENTER, "no data", FontId::proportional(13.0), th.text_dim);
189            return hover_msg(self.state.hover, None);
190        };
191        let plot = rect.shrink2(vec2(28.0, 24.0));
192        let span = (vmax - vmin).max(1e-9);
193        let y_of = |v: f64| plot.bottom() - ((v - vmin) / span) as f32 * plot.height();
194        let n = dens.len().max(1);
195        let slot = plot.width() / n as f32;
196        let half_w = (slot * 0.42).min(80.0);
197        let hover = resp.hover_pos();
198        let mut new_hover: Option<(usize, f64)> = None;
199        let base = ui.id().with("violin");
200
201        for (i, (name, d, median)) in dens.iter().enumerate() {
202            let cx = plot.left() + slot * (i as f32 + 0.5);
203            let color = facett_core::hash_color(name);
204            let peak = d.peak.max(1e-12);
205            // Build the mirrored silhouette: right edge down, left edge up.
206            let mut poly: Vec<Pos2> = Vec::with_capacity(d.grid.len() * 2);
207            for k in 0..d.grid.len() {
208                let w = (d.dens[k] / peak) as f32 * half_w;
209                poly.push(Pos2::new(cx + w, y_of(d.grid[k])));
210            }
211            for k in (0..d.grid.len()).rev() {
212                let w = (d.dens[k] / peak) as f32 * half_w;
213                poly.push(Pos2::new(cx - w, y_of(d.grid[k])));
214            }
215            painter.add(egui::Shape::convex_polygon(poly.clone(), color.gamma_multiply(0.40), Stroke::new(1.2_f32, th.accent)));
216            // AccessKit node over the violin's bounding box (FC-4): role=Image,
217            // label = the group name, numeric_value = the median (the silhouette's
218            // headline stat). Keyed on the group name (stable across reorder, FC-5).
219            // The box spans the silhouette's full value extent at ±half_w.
220            let (gmin, gmax) = (
221                d.grid.first().copied().unwrap_or(*median),
222                d.grid.last().copied().unwrap_or(*median),
223            );
224            let body_rect = Rect::from_min_max(
225                Pos2::new(cx - half_w, y_of(gmax)),
226                Pos2::new(cx + half_w, y_of(gmin)),
227            );
228            a11y_node(
229                ui,
230                base,
231                name,
232                Sense::hover(),
233                body_rect,
234                Semantics::image(name.clone()).value(*median),
235            );
236            // Median line across the body.
237            let mw = {
238                // density at the median, for the line half-width
239                let idx = d.grid.iter().enumerate().min_by(|a, b| {
240                    (a.1 - median).abs().partial_cmp(&(b.1 - median).abs()).unwrap()
241                }).map(|(i, _)| i).unwrap_or(0);
242                (d.dens[idx] / peak) as f32 * half_w
243            };
244            painter.line_segment([Pos2::new(cx - mw, y_of(*median)), Pos2::new(cx + mw, y_of(*median))], Stroke::new(2.0_f32, th.glow));
245            painter.text(Pos2::new(cx, plot.bottom() + 12.0), Align2::CENTER_CENTER, name, FontId::proportional(11.0), th.text);
246
247            // Pure hit-test: which silhouette + cursor value this frame.
248            if let Some(hp) = hover {
249                if hp.x >= cx - slot * 0.5 && hp.x < cx + slot * 0.5 && plot.y_range().contains(hp.y) {
250                    // map cursor y back to a value
251                    let v = vmin + ((plot.bottom() - hp.y) / plot.height()) as f64 * span;
252                    new_hover = Some((i, v));
253                }
254            }
255        }
256        // Tooltip painted from the *persisted* hover (set by `update` last frame),
257        // keeping `render` a pure function of `&self`.
258        if let Some(hp) = hover {
259            if let Some((i, v)) = self.state.hover {
260                if let Some((name, d, median)) = dens.get(i) {
261                    paint_tooltip(&painter, &th, hp, &format!("{name}\nvalue {v:.3}\nmedian {median:.3}\npeak {:.4}", d.peak));
262                }
263            }
264        }
265        // ── render-lane emit: this Facet::ui path RAN ─────────────────────────
266        #[cfg(feature = "testmatrix")]
267        facett_core::testmatrix::emit(
268            "facett-plotters::ViolinView::ui",
269            "ui_render",
270            !dens.is_empty() && dens.len() <= self.groups.len(),
271            &format!("groups={} violins={}", self.groups.len(), dens.len()),
272        );
273        hover_msg(self.state.hover, new_hover)
274    }
275}
276
277/// Emit a `Hover` message only when the hovered silhouette / cursor value changed.
278fn hover_msg(current: Option<(usize, f64)>, next: Option<(usize, f64)>) -> Vec<ViolinMsg> {
279    if current != next { vec![ViolinMsg::Hover(next)] } else { Vec::new() }
280}
281
282impl Elm for ViolinView {
283    type Model = ViolinState;
284    type Msg = ViolinMsg;
285    type Effect = ViolinEffect;
286
287    fn title(&self) -> &str {
288        &self.title
289    }
290    fn state(&self) -> &ViolinState {
291        &self.state
292    }
293    fn update(&mut self, msg: ViolinMsg) -> Vec<ViolinEffect> {
294        ViolinView::update(self, msg)
295    }
296    fn view(&self, ui: &mut Ui) -> Vec<ViolinMsg> {
297        self.render(ui)
298    }
299}
300
301// Form 3: richer derived `state_json` (bins + per-group median/peak/grid)
302// preserved exactly, so the macro's default `serde(state())` is suppressed.
303facett_core::impl_facet_via_elm!(ViolinView, custom_state_json, {
304    fn caps(&self) -> FacetCaps {
305        FacetCaps::NONE.themeable().copyable().resizable()
306    }
307    fn copy(&mut self) -> Option<String> {
308        Some(self.to_csv())
309    }
310    fn state_json(&self) -> serde_json::Value {
311        serde_json::json!({
312            "kind": "violin",
313            "bins": self.bins,
314            "groups": self.densities().iter().map(|(n, d, m)| serde_json::json!({
315                "name": n, "median": m, "peak": d.peak, "grid": d.grid.len(),
316            })).collect::<Vec<_>>(),
317        })
318    }
319});
320
321#[cfg(test)]
322mod tests {
323    use super::*;
324
325    #[test]
326    fn typed_copy_is_the_dataset_csv() {
327        use facett_core::clip::{ClipKind, CopySource};
328        let v = ViolinView::new("v", vec![("a".into(), vec![1.0, 2.0, 3.0])]);
329        let p = v.copy_payload().expect("groups copy");
330        assert_eq!(p.kind(), ClipKind::Text);
331        assert_eq!(p.as_text(), v.to_csv());
332    }
333
334    #[test]
335    fn kde_grid_and_density_lengths_match_bins() {
336        let d = kde(&[1.0, 2.0, 2.0, 3.0, 5.0], 32).unwrap();
337        assert_eq!(d.grid.len(), 32);
338        assert_eq!(d.dens.len(), 32);
339        assert!(d.peak > 0.0);
340    }
341
342    #[test]
343    fn kde_density_is_nonnegative_and_peaks_near_mode() {
344        // bimodal-ish: cluster at 0 and at 10
345        let mut data = vec![];
346        for _ in 0..20 { data.push(0.0); }
347        for _ in 0..20 { data.push(10.0); }
348        let d = kde(&data, 100).unwrap();
349        assert!(d.dens.iter().all(|&x| x >= 0.0));
350        // the densest grid point should sit near one of the two clusters
351        let (peak_i, _) = d.dens.iter().enumerate().max_by(|a, b| a.1.partial_cmp(b.1).unwrap()).unwrap();
352        let peak_x = d.grid[peak_i];
353        assert!(peak_x.abs() < 2.0 || (peak_x - 10.0).abs() < 2.0, "peak at {peak_x} should be near 0 or 10");
354    }
355
356    #[test]
357    fn kde_integrates_to_about_one() {
358        // A proper density integrates to ~1 over a wide grid.
359        let data: Vec<f64> = (0..200).map(|i| (i as f64) * 0.05).collect();
360        let d = kde(&data, 400).unwrap();
361        let dx = d.grid[1] - d.grid[0];
362        let area: f64 = d.dens.iter().sum::<f64>() * dx;
363        assert!((area - 1.0).abs() < 0.05, "area {area} should be ~1");
364    }
365
366    #[test]
367    fn kde_empty_is_none() {
368        assert!(kde(&[], 16).is_none());
369        assert!(kde(&[f64::NAN], 16).is_none());
370    }
371
372    #[test]
373    fn silverman_positive_even_for_constant_sample() {
374        assert!(silverman_bandwidth(&[5.0, 5.0, 5.0]) > 0.0);
375        assert!(silverman_bandwidth(&[]) > 0.0);
376    }
377
378    #[test]
379    fn csv_header_and_rows() {
380        let v = ViolinView::new("t", vec![("a".into(), vec![1.0, 2.0, 3.0])]);
381        let csv = v.to_csv();
382        assert!(csv.starts_with("group,n,median,peak_density\n"));
383        assert_eq!(csv.lines().count(), 2);
384    }
385
386    // ── Elm (FC-2/FC-3) harness properties ────────────────────────────────
387    #[test]
388    fn hover_transitions_are_observable() {
389        let mut v = ViolinView::new(
390            "t",
391            vec![("a".into(), vec![1.0, 2.0, 3.0]), ("b".into(), vec![4.0, 5.0, 6.0])],
392        );
393        assert_eq!(v.state().hover, None);
394        let snap = facett_core::harness::snapshot(&mut v, [ViolinMsg::Hover(Some((1, 4.5)))]);
395        assert_eq!(snap.hover, Some((1, 4.5)));
396        let snap = facett_core::harness::snapshot(&mut v, [ViolinMsg::Hover(None)]);
397        assert_eq!(snap.hover, None);
398    }
399
400    #[test]
401    fn drive_produces_no_effects() {
402        let mut v = ViolinView::new("t", vec![("a".into(), vec![1.0, 2.0, 3.0])]);
403        let effects = facett_core::harness::drive(&mut v, [ViolinMsg::Hover(Some((0, 2.0))), ViolinMsg::Hover(None)]);
404        assert!(effects.is_empty());
405    }
406
407    #[test]
408    fn state_serde_round_trips() {
409        let st = ViolinState { hover: Some((2, 7.25)) };
410        let back: ViolinState = serde_json::from_value(serde_json::to_value(&st).unwrap()).unwrap();
411        assert_eq!(st, back);
412    }
413}