List of all items
Structs
- ExonSession
- datasources::ExonListingTableFactory
- datasources::bam::BAMIndexedScanFunction
- datasources::bam::BAMOpener
- datasources::bam::BAMScan
- datasources::bam::BAMScanFunction
- datasources::bam::IndexedBAMScan
- datasources::bam::table_provider::ListingBAMTable
- datasources::bam::table_provider::ListingBAMTableOptions
- datasources::bcf::BCFOpener
- datasources::bcf::BCFScan
- datasources::bcf::BCFScanFunction
- datasources::bcf::table_provider::ListingBCFTable
- datasources::bcf::table_provider::ListingBCFTableOptions
- datasources::bed::BEDOpener
- datasources::bed::BEDOptions
- datasources::bed::BEDScan
- datasources::bed::BEDScanFunction
- datasources::bed::table_provider::ListingBEDTable
- datasources::bed::table_provider::ListingBEDTableOptions
- datasources::bigwig::value::ListingTable
- datasources::bigwig::value::ListingTableOptions
- datasources::bigwig::zoom::ListingTable
- datasources::bigwig::zoom::ListingTableConfig
- datasources::bigwig::zoom::ListingTableOptions
- datasources::cram::table_provider::ListingCRAMTable
- datasources::cram::table_provider::ListingCRAMTableConfig
- datasources::cram::table_provider::ListingCRAMTableOptions
- datasources::exon_listing_table_options::ExonListingConfig
- datasources::fasta::FASTAOpener
- datasources::fasta::FASTAOptions
- datasources::fasta::FASTAScan
- datasources::fasta::FastaIndexedScanFunction
- datasources::fasta::FastaScanFunction
- datasources::fasta::table_provider::ListingFASTATable
- datasources::fasta::table_provider::ListingFASTATableOptions
- datasources::fastq::FASTQOpener
- datasources::fastq::FASTQScan
- datasources::fastq::FastqScanFunction
- datasources::fastq::table_provider::ListingFASTQTable
- datasources::fastq::table_provider::ListingFASTQTableOptions
- datasources::fcs::FCSScan
- datasources::fcs::FCSScanFunction
- datasources::fcs::table_provider::ListingFCSTable
- datasources::fcs::table_provider::ListingFCSTableConfig
- datasources::fcs::table_provider::ListingFCSTableOptions
- datasources::genbank::GenbankOpener
- datasources::genbank::GenbankScan
- datasources::genbank::GenbankScanFunction
- datasources::genbank::table_provider::ListingGenbankTable
- datasources::genbank::table_provider::ListingGenbankTableOptions
- datasources::gff::GFFIndexedScanFunction
- datasources::gff::GFFOpener
- datasources::gff::GFFScan
- datasources::gff::GFFScanFunction
- datasources::gff::table_provider::ListingGFFTable
- datasources::gff::table_provider::ListingGFFTableOptions
- datasources::gtf::GTFOpener
- datasources::gtf::GTFScan
- datasources::gtf::GTFScanFunction
- datasources::gtf::table_provider::ListingGTFTable
- datasources::gtf::table_provider::ListingGTFTableOptions
- datasources::hmmdomtab::HMMDomTabConfig
- datasources::hmmdomtab::HMMDomTabOpener
- datasources::hmmdomtab::HMMDomTabScan
- datasources::hmmdomtab::HMMDomTabScanFunction
- datasources::hmmdomtab::table_provider::ListingHMMDomTabTable
- datasources::hmmdomtab::table_provider::ListingHMMDomTabTableOptions
- datasources::mzml::MzMLOpener
- datasources::mzml::MzMLScan
- datasources::mzml::MzMLScanFunction
- datasources::mzml::table_provider::ListingMzMLTable
- datasources::mzml::table_provider::ListingMzMLTableOptions
- datasources::sam::SAMOpener
- datasources::sam::SAMScan
- datasources::sam::SAMScanFunction
- datasources::sam::table_provider::ListingSAMTable
- datasources::sam::table_provider::ListingSAMTableOptions
- datasources::sdf::ListingSDFTable
- datasources::sdf::ListingSDFTableOptions
- datasources::vcf::IndexedVCFScanner
- datasources::vcf::ListingVCFTable
- datasources::vcf::ListingVCFTableOptions
- datasources::vcf::VCFIndexedScanFunction
- datasources::vcf::VCFOpener
- datasources::vcf::VCFScan
- datasources::vcf::VCFScanFunction
- datasources::vcf::VCFSchemaBuilder
- ffi::DataFrameRecordBatchStream
- physical_plan::file_scan_config_builder::FileScanConfigBuilder
- physical_plan::planner::ExonQueryPlanner
- physical_plan::pos_interval_physical_expr::PosIntervalPhysicalExpr
- physical_plan::region_name_physical_expr::RegionNamePhysicalExpr
- physical_plan::region_physical_expr::RegionPhysicalExpr
- physical_plan::start_end_interval_physical_expr::StartEndIntervalPhysicalExpr
- physical_plan::start_end_region_physical_expr::StartEndRegionPhysicalExpr
- streaming_bgzf::AsyncBGZFReader
- udfs::sequence::reverse_complement::ReverseComplement
Enums
Traits
- ExonRuntimeEnvExt
- datasources::ExonFileScanConfig
- datasources::exon_listing_table_options::ExonFileIndexedListingOptions
- datasources::exon_listing_table_options::ExonIndexedListingOptions
- datasources::exon_listing_table_options::ExonListingOptions
- datasources::exon_listing_table_options::ExonSequenceDataTypeOptions
Functions
- datasources::infer_file_type_and_compression
- ffi::create_dataset_stream_from_table_provider
- new_exon_config
- physical_plan::object_store::get_byte_region
- physical_plan::object_store::list_files_for_scan
- physical_plan::object_store::pruned_partition_list
- udfs::massspec::register_udfs
- udfs::register_bigwig_region_filter_udf
- udfs::sequence::register_udfs
- udfs::vcf::register_vcf_udfs