List of all items
Structs
- datasources::ExonListingTableFactory
- datasources::bam::BAMOpener
- datasources::bam::BAMScan
- datasources::bam::IndexedBAMScan
- datasources::bam::table_provider::ListingBAMTable
- datasources::bam::table_provider::ListingBAMTableConfig
- datasources::bam::table_provider::ListingBAMTableOptions
- datasources::bcf::BCFConfig
- datasources::bcf::BCFOpener
- datasources::bcf::BCFScan
- datasources::bcf::table_provider::ListingBCFTable
- datasources::bcf::table_provider::ListingBCFTableConfig
- datasources::bcf::table_provider::ListingBCFTableOptions
- datasources::bed::BEDOpener
- datasources::bed::BEDScan
- datasources::bed::table_provider::ListingBEDTable
- datasources::bed::table_provider::ListingBEDTableConfig
- datasources::bed::table_provider::ListingBEDTableOptions
- datasources::fasta::FASTAOpener
- datasources::fasta::FASTAScan
- datasources::fasta::table_provider::ListingFASTATable
- datasources::fasta::table_provider::ListingFASTATableConfig
- datasources::fasta::table_provider::ListingFASTATableOptions
- datasources::fastq::FASTQOpener
- datasources::fastq::FASTQScan
- datasources::fastq::table_provider::ListingFASTQTable
- datasources::fastq::table_provider::ListingFASTQTableConfig
- datasources::fastq::table_provider::ListingFASTQTableOptions
- datasources::gff::GFFOpener
- datasources::gff::GFFScan
- datasources::gff::table_provider::ListingGFFTable
- datasources::gff::table_provider::ListingGFFTableConfig
- datasources::gff::table_provider::ListingGFFTableOptions
- datasources::gtf::GTFOpener
- datasources::gtf::GTFScan
- datasources::gtf::table_provider::ListingGTFTable
- datasources::gtf::table_provider::ListingGTFTableConfig
- datasources::gtf::table_provider::ListingGTFTableOptions
- datasources::hmmdomtab::HMMDomTabConfig
- datasources::hmmdomtab::HMMDomTabOpener
- datasources::hmmdomtab::HMMDomTabScan
- datasources::hmmdomtab::table_provider::ListingHMMDomTabTable
- datasources::hmmdomtab::table_provider::ListingHMMDomTabTableConfig
- datasources::hmmdomtab::table_provider::ListingHMMDomTabTableOptions
- datasources::sam::SAMArrayBuilder
- datasources::sam::SAMConfig
- datasources::sam::SAMOpener
- datasources::sam::SAMScan
- datasources::sam::SAMSchemaBuilder
- datasources::sam::table_provider::ListingSAMTable
- datasources::sam::table_provider::ListingSAMTableConfig
- datasources::sam::table_provider::ListingSAMTableOptions
- datasources::vcf::AsyncBatchStream
- datasources::vcf::IndexedVCFScanner
- datasources::vcf::ListingVCFTable
- datasources::vcf::ListingVCFTableOptions
- datasources::vcf::VCFArrayBuilder
- datasources::vcf::VCFConfig
- datasources::vcf::VCFListingTableConfig
- datasources::vcf::VCFOpener
- datasources::vcf::VCFScan
- datasources::vcf::VCFSchemaBuilder
- error::invalid_chrom::InvalidRegionNameError
- error::invalid_interval::InvalidIntervalError
- error::invalid_region::InvalidRegionError
- logical_optimizer::PositionBetweenRewriter
- physical_plan::file_scan_config_builder::FileScanConfigBuilder
- physical_plan::pos_interval_physical_expr::PosIntervalPhysicalExpr
- physical_plan::region_name_physical_expr::RegionNamePhysicalExpr
- physical_plan::region_physical_expr::RegionPhysicalExpr
- physical_plan::start_end_interval_physical_expr::StartEndIntervalPhysicalExpr
- physical_plan::start_end_region_physical_expr::StartEndRegionPhysicalExpr
- streaming_bgzf::AsyncBGZFReader
Enums
Traits
Functions
- datasources::infer_file_type_and_compression
- new_exon_config
- physical_plan::object_store::get_byte_region
- physical_plan::object_store::list_files_for_scan
- physical_plan::object_store::pruned_partition_list
- udfs::bam_region_filter::register_bam_region_filter_udf
- udfs::massspec::register_udfs
- udfs::samflags::is_duplicate
- udfs::samflags::is_first_segment
- udfs::samflags::is_last_segment
- udfs::samflags::is_mate_reverse_complemented
- udfs::samflags::is_mate_unmapped
- udfs::samflags::is_properly_aligned
- udfs::samflags::is_qc_fail
- udfs::samflags::is_reverse_complemented
- udfs::samflags::is_secondary
- udfs::samflags::is_segmented
- udfs::samflags::is_supplementary
- udfs::samflags::is_unmapped
- udfs::samflags::register_udfs
- udfs::sequence::gc_content
- udfs::sequence::register_udfs
- udfs::sequence::reverse_complement
- udfs::vcf::chrom_match
- udfs::vcf::create_chrom_udf
- udfs::vcf::create_interval_udf
- udfs::vcf::create_region_udf
- udfs::vcf::interval_match
- udfs::vcf::region_match
- udfs::vcf::register_vcf_udfs