Struct distances::strings::Penalties

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pub struct Penalties<U: UInt> { /* private fields */ }
Expand description

Penalties to use in the Needleman-Wunsch distance calculation.

Since we provide a distance implementation that is intended to be used as a metric that obeys the triangle inequality, the penalties should all be non-negative, thus the genericity over unsigned integers.

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impl<U: UInt> Penalties<U>

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pub const fn new(match_: U, mismatch: U, gap: U) -> Self

Create a set of penalties to use for the NW distance metric.

Trait Implementations§

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impl<U: Clone + UInt> Clone for Penalties<U>

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fn clone(&self) -> Penalties<U>

Returns a copy of the value. Read more
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fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source. Read more
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impl<U: Debug + UInt> Debug for Penalties<U>

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fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter. Read more
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impl<U: UInt> Default for Penalties<U>

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fn default() -> Self

Returns the “default value” for a type. Read more
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impl<U: Copy + UInt> Copy for Penalties<U>

Auto Trait Implementations§

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impl<U> Freeze for Penalties<U>
where U: Freeze,

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impl<U> RefUnwindSafe for Penalties<U>
where U: RefUnwindSafe,

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impl<U> Send for Penalties<U>

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impl<U> Sync for Penalties<U>

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impl<U> Unpin for Penalties<U>
where U: Unpin,

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impl<U> UnwindSafe for Penalties<U>
where U: UnwindSafe,

Blanket Implementations§

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impl<T> Any for T
where T: 'static + ?Sized,

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fn type_id(&self) -> TypeId

Gets the TypeId of self. Read more
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impl<T> Borrow<T> for T
where T: ?Sized,

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fn borrow(&self) -> &T

Immutably borrows from an owned value. Read more
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impl<T> BorrowMut<T> for T
where T: ?Sized,

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fn borrow_mut(&mut self) -> &mut T

Mutably borrows from an owned value. Read more
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impl<T> From<T> for T

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fn from(t: T) -> T

Returns the argument unchanged.

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impl<T, U> Into<U> for T
where U: From<T>,

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fn into(self) -> U

Calls U::from(self).

That is, this conversion is whatever the implementation of From<T> for U chooses to do.

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impl<T> ToOwned for T
where T: Clone,

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type Owned = T

The resulting type after obtaining ownership.
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fn to_owned(&self) -> T

Creates owned data from borrowed data, usually by cloning. Read more
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fn clone_into(&self, target: &mut T)

Uses borrowed data to replace owned data, usually by cloning. Read more
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impl<T, U> TryFrom<U> for T
where U: Into<T>,

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type Error = Infallible

The type returned in the event of a conversion error.
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fn try_from(value: U) -> Result<T, <T as TryFrom<U>>::Error>

Performs the conversion.
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impl<T, U> TryInto<U> for T
where U: TryFrom<T>,

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type Error = <U as TryFrom<T>>::Error

The type returned in the event of a conversion error.
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fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>

Performs the conversion.
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impl<V, T> VZip<V> for T
where V: MultiLane<T>,

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fn vzip(self) -> V