Module qc 

The cell QC figure: for each rule, the histogram of its metric in three layers (every cell, the cells passing the other rules, the cells only it removes) with its edge; total counts against detected genes, coloured by the mito fraction with removed cells ringed; cells per gene with the gene rule; and the removed cells by the rules they fail. The view draws the same panels (panel) as images.

Enums

Panel

One panel of the figure.

Functions

draw_panel

Draw panel into the box (x, y, w, h) of c; cursor marks a value under a rule’s histogram.

edge_text

≥ 92.9 (5 MADs), or off.

figure

The whole figure, its title naming the data.

panel

panel alone as SVG, w x h points: what a view shows as an image.

panels

The panels the figure has for rules, in order.

shown

An edge as qc prints it: counts to a tenth, fractions to four places.