Module orf 

Open Reading Frame (ORF) finder.

Scans nucleotide sequences for ORFs across all six reading frames (three forward, three reverse complement). An ORF begins at a start codon (ATG by default) and extends to the next in-frame stop codon (TAA, TAG, TGA) or the end of the sequence.

Structs

OrfResult

Result of an ORF search.

Enums

Strand

Strand orientation.

Functions

find_orfs

Find ORFs in all three forward reading frames.

find_orfs_both_strands

Find ORFs in all six reading frames (forward + reverse complement).

find_orfs_with_codons

Find ORFs on the forward strand using configurable start/stop codons.