Module read_sim 

Illumina-style short-read simulator.

Generates synthetic paired-end or single-end reads from a reference sequence, with configurable coverage, fragment sizes, and a position-dependent error profile that mimics Illumina 3’ quality degradation.

Structs

ReadSimConfig

Configuration for the read simulator.

SimulatedRead

A single simulated read with its true genomic origin.

Functions

simulate_reads

Simulate Illumina-style reads from a reference sequence.