Module umgap::commands

The subcommands of the umgap command.

Modules

• bestof
  The umgap bestof command.
• buildindex
  The umgap buildindex command.
• fastq2fasta
  The umgap fastq2fasta command.
• filter
  The umgap filter command.
• joinkmers
  The umgap joinkmers command.
• pept2lca
  The umgap pept2lca command.
• printindex
  The umgap printindex command.
• prot2kmer
  The umgap prot2kmer command.
• prot2tryp
  The umgap prot2tryp command.
• prot2tryp2lca
  The umgap prot2tryp2lca command.
• seedextend
  The umgap seedextend command.
• snaptaxon
  The umgap snaptaxon command.
• splitkmers
  The umgap splitkmers command.
• taxa2agg
  The umgap taxa2agg command.
• taxa2freq
  The umgap taxa2freq command.
• taxa2tree
  The umgap taxa2tree command.
• taxonomy
  The umgap taxonomy command.
• translate
  The umgap translate command
• uniq
  The umgap uniq command.