Struct tskit::bindings::_tsk_ls_hmm_t

source · 
#[repr(C)]
pub struct _tsk_ls_hmm_t {
Show 31 fields
    pub tree_sequence: *mut tsk_treeseq_t,
    pub recombination_rate: *mut f64,
    pub mutation_rate: *mut f64,
    pub alleles: *mut *mut *const c_char,
    pub precision: c_uint,
    pub num_alleles: *mut u32,
    pub num_samples: tsk_size_t,
    pub num_sites: tsk_size_t,
    pub num_nodes: tsk_size_t,
    pub tree: tsk_tree_t,
    pub diffs: tsk_diff_iter_t,
    pub parent: *mut tsk_id_t,
    pub transitions: *mut tsk_value_transition_t,
    pub transitions_copy: *mut tsk_value_transition_t,
    pub transition_stack: *mut tsk_transition_stack_t,
    pub transition_index: *mut tsk_id_t,
    pub transition_time_order: *mut tsk_argsort_t,
    pub num_transitions: tsk_size_t,
    pub max_transitions: tsk_size_t,
    pub values: *mut f64,
    pub num_values: tsk_size_t,
    pub max_values: tsk_size_t,
    pub max_parsimony_words: tsk_size_t,
    pub num_optimal_value_set_words: tsk_size_t,
    pub optimal_value_sets: *mut u64,
    pub transition_parent: *mut tsk_id_t,
    pub num_transition_samples: *mut tsk_size_t,
    pub allelic_state: *mut i32,
    pub next_probability: Option<unsafe extern "C" fn(arg1: *mut _tsk_ls_hmm_t, arg2: tsk_id_t, arg3: f64, arg4: bool, arg5: tsk_id_t, arg6: *mut f64) -> c_int>,
    pub compute_normalisation_factor: Option<unsafe extern "C" fn(arg1: *mut _tsk_ls_hmm_t) -> f64>,
    pub output: *mut c_void,

}

Fields

tree_sequence: *mut tsk_treeseq_trecombination_rate: *mut f64mutation_rate: *mut f64alleles: *mut *mut *const c_charprecision: c_uintnum_alleles: *mut u32num_samples: tsk_size_tnum_sites: tsk_size_tnum_nodes: tsk_size_ttree: tsk_tree_tdiffs: tsk_diff_iter_tparent: *mut tsk_id_ttransitions: *mut tsk_value_transition_ttransitions_copy: *mut tsk_value_transition_ttransition_stack: *mut tsk_transition_stack_ttransition_index: *mut tsk_id_ttransition_time_order: *mut tsk_argsort_tnum_transitions: tsk_size_tmax_transitions: tsk_size_tvalues: *mut f64num_values: tsk_size_tmax_values: tsk_size_tmax_parsimony_words: tsk_size_tnum_optimal_value_set_words: tsk_size_toptimal_value_sets: *mut u64transition_parent: *mut tsk_id_tnum_transition_samples: *mut tsk_size_tallelic_state: *mut i32next_probability: Option<unsafe extern "C" fn(arg1: *mut _tsk_ls_hmm_t, arg2: tsk_id_t, arg3: f64, arg4: bool, arg5: tsk_id_t, arg6: *mut f64) -> c_int>compute_normalisation_factor: Option<unsafe extern "C" fn(arg1: *mut _tsk_ls_hmm_t) -> f64>output: *mut c_void

Trait Implementations

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impl Clone for _tsk_ls_hmm_t

Returns a copy of the value. Read more
Performs copy-assignment from source. Read more
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impl Debug for _tsk_ls_hmm_t

Formats the value using the given formatter. Read more
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impl Copy for _tsk_ls_hmm_t

Auto Trait Implementations

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