Struct sourmash::index::bigsi::BIGSI

pub struct BIGSI<L> { /* fields omitted */ }

Implementations

impl<L> BIGSI<L>

pub fn builder() -> BIGSIBuilder<((), (), ()), L>

Create a builder for building BIGSI. On the builder, call .matrix(...), .ksize(...), .datasets(...) to set the values of the fields. Finally, call .build() to create the instance of BIGSI.

impl<L> BIGSI<L>

pub fn new(bf_size: usize, ksize: usize) -> BIGSI<L>

impl BIGSI<Signature>

pub fn add(&mut self, dataset: Signature)

pub fn query(&self, hash: u64) -> impl Iterator<Item = usize> + '_

pub fn query_datasets(&self, hash: u64) -> impl Iterator<Item = Signature> + '_

Trait Implementations

impl<L: Clone> Clone for BIGSI<L>

fn clone(&self) -> BIGSI<L>

Returns a copy of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl<'a> Index<'a> for BIGSI<Signature>

type Item = Signature

fn search(
    &self,
    sig: &Self::Item,
    threshold: f64,
    containment: bool
) -> Result<Vec<&Self::Item>, Error>

fn insert(&mut self, node: Self::Item) -> Result<(), Error>

fn save<P: AsRef<Path>>(&self, _path: P) -> Result<(), Error>

fn load<P: AsRef<Path>>(_path: P) -> Result<(), Error>

fn signatures(&self) -> Vec<Self::Item>

fn signature_refs(&self) -> Vec<&Self::Item>

fn find<F>(
    &self,
    search_fn: F,
    sig: &Self::Item,
    threshold: f64
) -> Result<Vec<&Self::Item>, Error> where
    F: Fn(&dyn Comparable<Self::Item>, &Self::Item, f64) -> bool, 

fn batch_insert(&mut self, nodes: Vec<Self::Item>) -> Result<(), Error>