1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
//! Welford online algorithm for computing mean and variance on-the-fly
//! over a sliding window

use crate::View;
use std::collections::VecDeque;

/// Welford online algorithm for computing mean and variance on-the-fly
/// over a sliding window
#[derive(Clone)]
pub struct WelfordOnline<V> {
    view: V,
    window_len: usize,
    q_vals: VecDeque<f64>,
    mean: f64,
    s: f64,
    n: usize,
}

impl<V> std::fmt::Debug for WelfordOnline<V>
where
    V: View,
{
    fn fmt(&self, fmt: &mut std::fmt::Formatter<'_>) -> Result<(), std::fmt::Error> {
        write!(
            fmt,
            "WelfordOnlineSliding(window_len: {}, q_vals: {:?}, mean: {}, s: {}, n: {})",
            self.window_len, self.q_vals, self.mean, self.s, self.n
        )
    }
}

impl<V> WelfordOnline<V>
where
    V: View,
{
    /// Create a WelfordOnline struct with a chained View
    #[inline]
    pub fn new(view: V, window_len: usize) -> Self {
        Self {
            view,
            window_len,
            q_vals: VecDeque::new(),
            mean: 0.0,
            s: 0.0,
            n: 0,
        }
    }

    /// Return the variance of the sliding window
    #[inline(always)]
    pub fn variance(&self) -> f64 {
        if self.n > 1 {
            self.s / (self.n as f64 - 1.0)
        } else {
            0.0
        }
    }

    /// Return the mean of the sliding window
    #[inline(always)]
    pub fn mean(&self) -> f64 {
        self.mean
    }
}

impl<V> View for WelfordOnline<V>
where
    V: View,
{
    fn update(&mut self, val: f64) {
        self.view.update(val);
        let val = self.view.last();

        if self.q_vals.len() >= self.window_len {
            let old_val: f64 = self.q_vals.pop_front().unwrap();
            // remove old value from estimation
            let new_mean = (self.n as f64 * self.mean - old_val) / (self.n as f64 - 1.0);
            self.s -= (old_val - self.mean) * (old_val - new_mean);
            self.mean = new_mean;
            self.n -= 1;
        }
        self.q_vals.push_back(val);

        self.n += 1;
        let old_mean = self.mean;
        self.mean += (val - old_mean) / self.n as f64;
        self.s += (val - old_mean) * (val - self.mean);
    }

    #[inline(always)]
    fn last(&self) -> f64 {
        self.variance().sqrt()
    }
}

#[cfg(test)]
mod tests {
    use super::*;
    use crate::plot::plot_values;
    use crate::test_data::TEST_DATA;
    use crate::Echo;
    use round::round;

    #[test]
    fn welford_online() {
        let mut wo = WelfordOnline::new(Echo::new(), TEST_DATA.len());
        for v in &TEST_DATA {
            wo.update(*v);
            assert!(!wo.last().is_nan());
        }
        let w_std_dev = wo.last();

        // compute the standard deviation with the regular formula
        let avg: f64 = TEST_DATA.iter().sum::<f64>() / TEST_DATA.len() as f64;
        let std_dev: f64 = ((1.0 / (TEST_DATA.len() as f64 - 1.0))
            * TEST_DATA.iter().map(|v| (v - avg).powi(2)).sum::<f64>())
        .sqrt();

        assert_eq!(round(w_std_dev, 4), round(std_dev, 4));
    }

    #[test]
    fn welford_online_plot() {
        let mut wo = WelfordOnline::new(Echo::new(), 16);
        let mut out: Vec<f64> = vec![];
        for v in &TEST_DATA {
            wo.update(*v);
            out.push(wo.last());
        }
        let filename = "img/welford_online_sliding.png";
        plot_values(out, filename).unwrap();
    }
}