ross 0.1.7

A set of scripts to run basic analysis on fastq files
Documentation
@read0/1
CTTTCCAGCATGAGAGAATACCCCGGGACCAGGCCTATAGCAAATGCGTCGTTGGTCATCTTCGGCGCCCTACTTGTCAAGATCTCATATTTTGCTATAG
+
+65%H3?2B7E'<42):&?D?.+=0H5>9%99!'4!EC(#37&5I2=)92F&/B&>=);-2?H/%3&(#>I?4G>9;:FH&HADI=;/!D.1/B6,B:.'
@read0/2
GAGTTCAGCCTTGTCCCATTAATCATTTGACGTATTAATCGGCCTCAAAACCTACACGCACGATACGCGGCATGCGGAAGCCAGAAAAGAGGATCTCAAG
+
&F.'(7"@>'*;@&D:1.G);A2)0<-AI5&?5!E7#:F%A7/'$B!"0/$5<@CA-!&,>0A$<#2<6I+7A9($1I0)>58(A3$73"F;4'IAE!>3
@read1/1
AACGGATATGATGAGTTAATGAAATGAACATGGATTGATACAGCCGCGCCACTAGCAATGAAAGTTAGCACGTTTTTGGCATCAGGCCATGCTGAAGGGG
+
@0E'9;0=+3B%@E%/-4/&)H;C3-7I&3$#AC%.#4G-H<&?&48<BB%%EF8A:%"445,GH@$=!.I.&<%36.9C0A?A"A=F1-24+*)BCC!4
@read1/2
CTAAGTACAAAGCTCCTGGCCGCCTGTCTCTTGCAAAAACATCTATGGCCTCAAACACCGGGTGCGCACCCAAGTCCTCATGCGACGCAATTATTATTGT
+
5:.92-0=,6HG"BE#*(25*!!F;4F*1D1A*6+0"#9B<'#A4&3'D$C5,1=?69H<0#$F#+E#<'*'D$*1202"*4!8+$%#(E?@@H#@/.=(
@read2/1
CCCCAAACATGATAAGGGCCTTGGTTGTAAGCCGATAACTACACTTTGACCGCGGCCCAGACTCCCTAATCGACTCATTTTCAGCTTGCTGGCTGTGGTT
+
1)5)%5*4<6DHGG@5;1A57*)08'0E3@8:563"?$E!+A"1(4H12767>>68E!">B8:$7*9E'1I'<>1E(2$@1$$&%&I6=GG.<9=F5D!@
@read2/2
CGCAGGGGAAATTGCCTCTTCACCATGGCGACAGGATACGGCAGGTCGACATGGTTCTCGGTTGCAACAGCTTAATATCCTTAGGCAAGTTATCACAAAA
+
D"4B6)"G9'?&,.'2AFH)4*DA+(.427=&:@):1<&5DHH.4=$>3%<9C0H+$!4;63/7+6@7.($5'?''4HD;88%E,,5&%D8G8>4</C$(
@read3/1
AGTCTTCTCGCCTCCACGCCTGTTTCGTGCGCACATTTGCCAGCTGCAAATCAACGGGATTCGTACAGCAACATTCGATGTACGCGATTGCGAGGAAATA
+
,9;*;?7?!A6I9#E-&>'F%7D-'@D3;CDE:(CEC5II5=DE="(2!5-D8*4&0>,5*7E@E%")<C@5@9=A=!>+7>""5&>))GB3'5+39#EG
@read3/2
GACACCGACATCAGCACGGCCAGGAGCCAAAGACAGATCGCGAGACGACTCCTTGGCTCGAGGGCAACCTGTACGTATACCCAAGAACCAATCCCACAGG
+
)2,&0)D1*4!&)0::*??07:$/);%A<(.I?6B=/,G1A@'2!(A346:*!$?;:06=!*#F6/3";573+!$1'658"!>A,07?55IG&,G9A"5I