noodles 0.10.1

Bioinformatics I/O libraries
Documentation
# This file is automatically @generated by Cargo.
# It is not intended for manual editing.
version = 3

[[package]]
name = "adler"
version = "1.0.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "f26201604c87b1e01bd3d98f8d5d9a8fcbb815e8cedb41ffccbeb4bf593a35fe"

[[package]]
name = "autocfg"
version = "1.0.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "cdb031dd78e28731d87d56cc8ffef4a8f36ca26c38fe2de700543e627f8a464a"

[[package]]
name = "bit-vec"
version = "0.6.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "349f9b6a179ed607305526ca489b34ad0a41aed5f7980fa90eb03160b69598fb"

[[package]]
name = "bitflags"
version = "1.3.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "bef38d45163c2f1dde094a7dfd33ccf595c92905c8f8f4fdc18d06fb1037718a"

[[package]]
name = "block-buffer"
version = "0.9.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "4152116fd6e9dadb291ae18fc1ec3575ed6d84c29642d97890f4b4a3417297e4"
dependencies = [
 "generic-array",
]

[[package]]
name = "byteorder"
version = "1.4.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "14c189c53d098945499cdfa7ecc63567cf3886b3332b312a5b4585d8d3a6a610"

[[package]]
name = "bzip2"
version = "0.4.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "6afcd980b5f3a45017c57e57a2fcccbb351cc43a356ce117ef760ef8052b89b0"
dependencies = [
 "bzip2-sys",
 "libc",
]

[[package]]
name = "bzip2-sys"
version = "0.1.11+1.0.8"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "736a955f3fa7875102d57c82b8cac37ec45224a07fd32d58f9f7a186b6cd4cdc"
dependencies = [
 "cc",
 "libc",
 "pkg-config",
]

[[package]]
name = "cc"
version = "1.0.70"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "d26a6ce4b6a484fa3edb70f7efa6fc430fd2b87285fe8b84304fd0936faa0dc0"

[[package]]
name = "cfg-if"
version = "1.0.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "baf1de4339761588bc0619e3cbc0120ee582ebb74b53b4efbf79117bd2da40fd"

[[package]]
name = "crc32fast"
version = "1.2.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "81156fece84ab6a9f2afdb109ce3ae577e42b1228441eded99bd77f627953b1a"
dependencies = [
 "cfg-if",
]

[[package]]
name = "digest"
version = "0.9.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "d3dd60d1080a57a05ab032377049e0591415d2b31afd7028356dbf3cc6dcb066"
dependencies = [
 "generic-array",
]

[[package]]
name = "flate2"
version = "1.0.22"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "1e6988e897c1c9c485f43b47a529cef42fde0547f9d8d41a7062518f1d8fc53f"
dependencies = [
 "cfg-if",
 "crc32fast",
 "libc",
 "miniz_oxide",
]

[[package]]
name = "generic-array"
version = "0.14.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "501466ecc8a30d1d3b7fc9229b122b2ce8ed6e9d9223f1138d4babb253e51817"
dependencies = [
 "typenum",
 "version_check",
]

[[package]]
name = "hashbrown"
version = "0.11.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "ab5ef0d4909ef3724cc8cce6ccc8572c5c817592e9285f5464f8e86f8bd3726e"

[[package]]
name = "indexmap"
version = "1.7.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "bc633605454125dec4b66843673f01c7df2b89479b32e0ed634e43a91cff62a5"
dependencies = [
 "autocfg",
 "hashbrown",
]

[[package]]
name = "libc"
version = "0.2.103"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "dd8f7255a17a627354f321ef0055d63b898c6fb27eff628af4d1b66b7331edf6"

[[package]]
name = "lzma-sys"
version = "0.1.17"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "bdb4b7c3eddad11d3af9e86c487607d2d2442d185d848575365c4856ba96d619"
dependencies = [
 "cc",
 "libc",
 "pkg-config",
]

[[package]]
name = "md-5"
version = "0.9.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "7b5a279bb9607f9f53c22d496eade00d138d1bdcccd07d74650387cf94942a15"
dependencies = [
 "block-buffer",
 "digest",
 "opaque-debug",
]

[[package]]
name = "memchr"
version = "2.4.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "308cc39be01b73d0d18f82a0e7b2a3df85245f84af96fdddc5d202d27e47b86a"

[[package]]
name = "minimal-lexical"
version = "0.1.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "0c835948974f68e0bd58636fc6c5b1fbff7b297e3046f11b3b3c18bbac012c6d"

[[package]]
name = "miniz_oxide"
version = "0.4.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "a92518e98c078586bc6c934028adcca4c92a53d6a958196de835170a01d84e4b"
dependencies = [
 "adler",
 "autocfg",
]

[[package]]
name = "nom"
version = "7.0.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "7ffd9d26838a953b4af82cbeb9f1592c6798916983959be223a7124e992742c1"
dependencies = [
 "memchr",
 "minimal-lexical",
 "version_check",
]

[[package]]
name = "noodles"
version = "0.10.1"
dependencies = [
 "noodles-bam",
 "noodles-bcf",
 "noodles-bgzf",
 "noodles-core",
 "noodles-cram",
 "noodles-csi",
 "noodles-fasta",
 "noodles-fastq",
 "noodles-gff",
 "noodles-sam",
 "noodles-tabix",
 "noodles-vcf",
]

[[package]]
name = "noodles-bam"
version = "0.6.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "11673ac175036c3d91dbf7dee1d1cd42fda5a07ab1e156e7e42f1e3f7ad614e4"
dependencies = [
 "bit-vec",
 "byteorder",
 "noodles-bgzf",
 "noodles-core",
 "noodles-csi",
 "noodles-sam",
]

[[package]]
name = "noodles-bcf"
version = "0.6.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "279bdcdec439dd4be4fb732ebea63f544ad709de98a8b0da487145de527eeb94"
dependencies = [
 "byteorder",
 "indexmap",
 "noodles-bgzf",
 "noodles-core",
 "noodles-csi",
 "noodles-vcf",
]

[[package]]
name = "noodles-bgzf"
version = "0.4.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "8a928a96b98144cb5311fb51f4001ccad62c2c2327c1bb6ff335a3abffa632de"
dependencies = [
 "byteorder",
 "flate2",
]

[[package]]
name = "noodles-core"
version = "0.2.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "409fd8aa40444ea569ff3565d9efcad3c7ef511cb40e67d519a31be7ea161838"
dependencies = [
 "noodles-sam",
]

[[package]]
name = "noodles-cram"
version = "0.6.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "ec067f33feb63a706a9791a4f8a9fb790c4ec9ff8266893d4bdeb7fe41bfacb3"
dependencies = [
 "bitflags",
 "byteorder",
 "bzip2",
 "flate2",
 "md-5",
 "noodles-bam",
 "noodles-fasta",
 "noodles-sam",
 "xz2",
]

[[package]]
name = "noodles-csi"
version = "0.3.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "88955f81a8df01e35374713dd00c647aca9f5c27fb139798a31bd57e9ea525f9"
dependencies = [
 "bit-vec",
 "byteorder",
 "noodles-bgzf",
]

[[package]]
name = "noodles-fasta"
version = "0.3.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "392e160e032af86c421e3897d5325b994c5f53eab26b269e01ea4eceeee7a428"
dependencies = [
 "memchr",
 "noodles-bgzf",
 "noodles-core",
]

[[package]]
name = "noodles-fastq"
version = "0.2.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "16e8b91b54022c74ae8e72a370442f1018d8b2b905de7d8ad9c5cc9c16605469"

[[package]]
name = "noodles-gff"
version = "0.2.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "7e5e9c0e368ac63a4a6fb5df8b6f148ba394880722bfa1874372a5554a383f36"
dependencies = [
 "percent-encoding",
]

[[package]]
name = "noodles-sam"
version = "0.5.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "f477ebf7018498d42d443395ce3a85df15529fb02f7a9c44ecfac5a1cd5f2190"
dependencies = [
 "bitflags",
 "indexmap",
 "noodles-bgzf",
]

[[package]]
name = "noodles-tabix"
version = "0.6.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "7cc7d4f4aa689cc7df423eb613ecc4cb26304d423a9201b032624895fab15f14"
dependencies = [
 "bit-vec",
 "byteorder",
 "indexmap",
 "noodles-bgzf",
 "noodles-csi",
]

[[package]]
name = "noodles-vcf"
version = "0.7.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "f2cb11f7835f2f466a61d74bc062c786312795d73437e1cd095f9f2ab2a0f77f"
dependencies = [
 "indexmap",
 "memchr",
 "nom",
 "noodles-bgzf",
 "noodles-core",
 "noodles-csi",
 "noodles-tabix",
 "percent-encoding",
]

[[package]]
name = "opaque-debug"
version = "0.3.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "624a8340c38c1b80fd549087862da4ba43e08858af025b236e509b6649fc13d5"

[[package]]
name = "percent-encoding"
version = "2.1.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "d4fd5641d01c8f18a23da7b6fe29298ff4b55afcccdf78973b24cf3175fee32e"

[[package]]
name = "pkg-config"
version = "0.3.20"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "7c9b1041b4387893b91ee6746cddfc28516aff326a3519fb2adf820932c5e6cb"

[[package]]
name = "typenum"
version = "1.14.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "b63708a265f51345575b27fe43f9500ad611579e764c79edbc2037b1121959ec"

[[package]]
name = "version_check"
version = "0.9.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "5fecdca9a5291cc2b8dcf7dc02453fee791a280f3743cb0905f8822ae463b3fe"

[[package]]
name = "xz2"
version = "0.1.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "c179869f34fc7c01830d3ce7ea2086bc3a07e0d35289b667d0a8bf910258926c"
dependencies = [
 "lzma-sys",
]