Crate noodles_gff

Crate noodles_gff 

Source
Expand description

noodles-gff handles the reading and writing of the GFF3 format.

GFF (Generic Feature Format) is a text-based format used to represent genomic features.

§Examples

§Read all records

use noodles_gff as gff;

let mut reader = File::open("annotations.gff3")
    .map(BufReader::new)
    .map(gff::io::Reader::new)?;

for result in reader.record_bufs() {
    let record = result?;
    // ...
}

Re-exports§

pub use self::directive_buf::DirectiveBuf;
pub use self::line::Line;
pub use self::line_buf::LineBuf;
pub use self::record::Record;

Modules§

async
Async GFF.
directive_buf
GFF directives.
feature
Feature record.
io
GFF I/O.
line
GFF line.
line_buf
GFF lines.
record
GFF record.

Structs§

Directive
A GFF directive.