In development!

How to use

Requirements

Clang is required to build (probably....)

minimap2 = "1.1.5"

Create an Aligner

Many fields are i32 / i8 to mimic the C environment, but would it make more sense to convert to u32 / u8 / usize?
Let me know pain points

Probably not freeing C memory somewhere.... expect crashes

Print other tags so we can have an entire PAF format
Compile with SSE2 / SSE4.1 / SIMDe (auto-detect, but also make with features)
Multi-thread guide (tokio async threads or use crossbeam queue and traditional threads?)
Maybe should be split into 2 more libraries, minimap2-safe (lower but safe level) and minimap2 (high-level api) like zstd? - Then people can implement threading as they like or just fall back to a known-decent implementation?
Iterator interface for map_file

¯_(ツ)_/¯