Enum lt_fm_index::TextType
source · pub enum TextType {
NucleotideOnly,
NucleotideWithNoise,
AminoAcidOnly,
AminoAcidWithNoise,
}
Expand description
Text type marker
- NucleotideOnly
- ACG and wildcard
- NucleotideWithNoise
- ACGT and wildcard
- AminoAcidOnly
- ACDEFGHIKLMNPQRSTVW and wildcard
- AminoAcidWithNoise
- ACDEFGHIKLMNPQRSTVWY and wildcard
Variants§
Implementations§
source§impl TextType
impl TextType
pub fn new_inferred(text: &Vec<u8>) -> Result<Self, BuildError>
pub fn recommend_kmer_size(&self) -> usize
Trait Implementations§
source§impl Ord for TextType
impl Ord for TextType
source§impl PartialEq<TextType> for TextType
impl PartialEq<TextType> for TextType
source§impl PartialOrd<TextType> for TextType
impl PartialOrd<TextType> for TextType
1.0.0 · source§fn le(&self, other: &Rhs) -> bool
fn le(&self, other: &Rhs) -> bool
This method tests less than or equal to (for
self
and other
) and is used by the <=
operator. Read moreimpl Eq for TextType
impl StructuralEq for TextType
impl StructuralPartialEq for TextType
Auto Trait Implementations§
impl RefUnwindSafe for TextType
impl Send for TextType
impl Sync for TextType
impl Unpin for TextType
impl UnwindSafe for TextType
Blanket Implementations§
source§impl<Q, K> Equivalent<K> for Qwhere
Q: Eq + ?Sized,
K: Borrow<Q> + ?Sized,
impl<Q, K> Equivalent<K> for Qwhere
Q: Eq + ?Sized,
K: Borrow<Q> + ?Sized,
source§fn equivalent(&self, key: &K) -> bool
fn equivalent(&self, key: &K) -> bool
Compare self to
key
and return true
if they are equal.§impl<SS, SP> SupersetOf<SS> for SPwhere
SS: SubsetOf<SP>,
impl<SS, SP> SupersetOf<SS> for SPwhere
SS: SubsetOf<SP>,
§fn to_subset(&self) -> Option<SS>
fn to_subset(&self) -> Option<SS>
The inverse inclusion map: attempts to construct
self
from the equivalent element of its
superset. Read more§fn is_in_subset(&self) -> bool
fn is_in_subset(&self) -> bool
Checks if
self
is actually part of its subset T
(and can be converted to it).§fn to_subset_unchecked(&self) -> SS
fn to_subset_unchecked(&self) -> SS
Use with care! Same as
self.to_subset
but without any property checks. Always succeeds.§fn from_subset(element: &SS) -> SP
fn from_subset(element: &SS) -> SP
The inclusion map: converts
self
to the equivalent element of its superset.