libprosic 0.4.0

A library for calling of genomic variants using a latent variable model.
Documentation
chrom	pos	allele	sample	prob_mapping	prob_alt	prob_ref	prob_mismapped	evidence
chr1	68367	0	case	-1.5814737534	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-1.5814737534	0.0	-inf	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.0003162778	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.0003162778	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	0.0	-inf	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-1.5814737534	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.0003981864	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	0.0	-inf	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	0.0	-inf	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-1.5814737534	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-1.5814737534	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	0.0	-inf	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	0.0	-inf	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-1.5814737534	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-1.5814737534	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-1.5814737534	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	0.0	-inf	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-0.996843044	-inf	0.0	0.0	Alignment
chr1	68367	0	case	-1.993686088	-109.2358776232	-108.2692109565	0.0	329
chr1	68367	0	case	-1.993686088	-73.2469887343	-72.4625442899	0.0	288
chr1	68367	0	case	-3.1629475068	-93.4069887343	-92.5158776232	0.0	312
chr1	68367	0	case	-3.1629475068	-107.3069887343	-106.3492109565	0.0	327
chr1	68367	0	case	-1.993686088	-93.4069887343	-92.5158776232	0.0	312
chr1	68367	0	case	-1.993686088	-80.5069887343	-79.6825442899	0.0	297
chr1	68367	0	case	-1.993686088	-93.4069887343	-92.5158776232	0.0	312
chr1	68367	0	case	-1.993686088	-86.4025442899	-85.5469887343	0.0	304
chr1	68367	0	case	-3.1629475068	-139.2025442899	-138.1069887343	0.0	358
chr1	68367	0	case	-1.993686088	-87.2625442899	-86.4025442899	0.0	305
chr1	68367	0	case	-1.993686088	-88.1269887343	-87.2625442899	0.0	306
chr1	68367	0	case	-1.993686088	-88.1269887343	-87.2625442899	0.0	306
chr1	68367	0	case	-1.993686088	-72.4625442899	-71.6825442899	0.0	287
chr1	68367	0	case	-1.993686088	-109.2358776232	-108.2692109565	0.0	329
chr1	68367	0	case	-1.993686088	-91.6292109565	-90.7469887343	0.0	310
chr1	68367	0	case	-1.993686088	-91.6292109565	-90.7469887343	0.0	310
chr1	68367	0	case	-1.993686088	-94.3025442899	-93.4069887343	0.0	313
chr1	68367	0	case	-1.993686088	-118.1358776232	-117.1292109565	0.0	338
chr1	68367	0	case	-1.993686088	-93.4069887343	-92.5158776232	0.0	312
chr1	68367	0	case	-1.993686088	-84.6958776232	-83.8492109565	0.0	302
chr1	68367	0	case	-1.993686088	-82.1692109565	-81.3358776232	0.0	299
chr1	68367	0	case	-1.993686088	-113.1469887343	-112.1625442899	0.0	333
chr1	68367	0	case	-1.993686088	-88.9958776232	-88.1269887343	0.0	307
chr1	68367	0	case	-1.993686088	-88.9958776232	-88.1269887343	0.0	307
chr1	68367	0	case	-1.993686088	-82.1692109565	-81.3358776232	0.0	299
chr1	68367	0	case	-1.993686088	-100.6958776232	-99.7692109565	0.0	320
chr1	68367	0	case	-1.993686088	-86.4025442899	-85.5469887343	0.0	304
chr1	68367	0	case	-1.993686088	-95.2025442899	-94.3025442899	0.0	314
chr1	68367	0	case	-1.993686088	-70.1358776232	-69.3692109565	0.0	284
chr1	68367	0	case	-1.993686088	-86.4025442899	-85.5469887343	0.0	304
chr1	68367	0	case	-1.993686088	-115.1292109565	-114.1358776232	0.0	335
chr1	68367	0	case	-1.993686088	-92.5158776232	-91.6292109565	0.0	311
chr1	68367	0	case	-1.993686088	-94.3025442899	-93.4069887343	0.0	313
chr1	68367	0	case	-1.993686088	-121.1825442899	-120.1625442899	0.0	341
chr1	68367	0	case	-1.993686088	-114.1358776232	-113.1469887343	0.0	334
chr1	68367	0	case	-1.993686088	-93.4069887343	-92.5158776232	0.0	312
chr1	68367	0	case	-1.993686088	-88.1269887343	-87.2625442899	0.0	306
chr1	68367	0	case	-1.993686088	-94.3025442899	-93.4069887343	0.0	313
chr1	68367	0	case	-1.993686088	-98.8469887343	-97.9292109565	0.0	318
chr1	68367	0	case	-1.993686088	-90.7469887343	-89.8692109565	0.0	309
chr1	68367	0	case	-1.993686088	-88.1269887343	-87.2625442899	0.0	306
chr1	68367	0	case	-1.993686088	-80.5069887343	-79.6825442899	0.0	297
chr1	68367	0	case	-1.993686088	-93.4069887343	-92.5158776232	0.0	312
chr1	68367	0	case	-1.993686088	-87.2625442899	-86.4025442899	0.0	305
chr1	68367	0	case	-1.993686088	-82.1692109565	-81.3358776232	0.0	299
chr1	68367	0	case	-1.993686088	-87.2625442899	-86.4025442899	0.0	305
chr1	68367	0	case	-1.993686088	-90.7469887343	-89.8692109565	0.0	309
chr1	68367	0	case	-1.993686088	-89.8692109565	-88.9958776232	0.0	308
chr1	68367	0	case	-1.993686088	-92.5158776232	-91.6292109565	0.0	311
chr1	68367	0	case	-1.993686088	-97.0158776232	-96.1069887343	0.0	316
chr1	68367	0	case	-1.993686088	-91.6292109565	-90.7469887343	0.0	310
chr1	68367	0	case	-1.993686088	-92.5158776232	-91.6292109565	0.0	311
chr1	68367	0	case	-1.993686088	-117.1292109565	-116.1269887343	0.0	337
chr1	68367	0	case	-2.5783167974	-96.1069887343	-95.2025442899	0.0	315
chr1	68367	0	case	-1.993686088	-93.4069887343	-92.5158776232	0.0	312
chr1	68367	0	case	-1.993686088	-99.7692109565	-98.8469887343	0.0	319
chr1	68367	0	case	-1.993686088	-100.6958776232	-99.7692109565	0.0	320
chr1	68367	0	case	-1.993686088	-101.6269887343	-100.6958776232	0.0	321
chr1	68367	0	case	-1.993686088	-87.2625442899	-86.4025442899	0.0	305
chr1	68367	0	case	-1.993686088	-110.2069887343	-109.2358776232	0.0	330
chr1	68367	0	case	-1.993686088	-122.2069887343	-121.1825442899	0.0	342
chr1	68367	0	case	-1.993686088	-110.2069887343	-109.2358776232	0.0	330
chr1	68367	0	case	-3.1629475068	-113.1469887343	-112.1625442899	0.0	333
chr1	68367	0	case	-2.5783167974	-130.5625442899	-129.5025442899	0.0	350
chr1	68367	0	control	-0.0000000001	-inf	0.0	0.0	Alignment