libprosic 0.4.0

A library for calling of genomic variants using a latent variable model.
Documentation
Build #64222 2017-07-06 21:19:29

# rustc version rustc 1.19.0-dev (28a93c1f4 2017-05-31)

# docs.rs version cratesfyi 0.4.1 (003e49d 2017-06-08)

# build log Updating registry `https://github.com/rust-lang/crates.io-index` Downloading libprosic v0.4.0 Fresh rustc-serialize v0.3.24 Fresh void v1.0.2 Fresh percent-encoding v1.0.0 Fresh pkg-config v0.3.9 Fresh unicode-xid v0.0.4 Fresh bit-vec v0.4.4 Fresh rawpointer v0.1.0 Fresh libc v0.2.24 Fresh custom_derive v0.1.7 Fresh lazy_static v0.2.8 Fresh unreachable v1.0.0 Fresh synom v0.11.3 Fresh approx v0.1.1 Fresh memchr v1.0.1 Fresh quick-error v1.2.0 Fresh quote v0.3.15 Fresh matches v0.1.6 Fresh ieee754 v0.2.2 Fresh semver v0.1.20 Fresh aho-corasick v0.6.3 Fresh regex-syntax v0.4.1 Fresh thread_local v0.3.4 Fresh unicode-bidi v0.3.3 Fresh syn v0.11.11 Fresh rustc_version v0.1.7 Fresh unicode-normalization v0.1.5 Fresh bit-set v0.4.0 Fresh utf8-ranges v1.0.0 Fresh c_vec v1.0.12 Fresh either v1.1.0 Fresh bitflags v0.9.1 Fresh idna v0.1.2 Fresh num-traits v0.1.39 Fresh regex v0.2.2 Compiling GSL v0.4.31 Compiling itertools v0.5.10 Fresh byteorder v1.0.0 Fresh serde_derive_internals v0.15.1 Fresh url v1.5.1 Fresh num-integer v0.1.34 Fresh num-complex v0.1.38 Running `rustc --crate-name rgsl .cargo/registry/src/github.com-1ecc6299db9ec823/GSL-0.4.31/src/rgsl.rs --crate-type dylib --crate-type rlib --emit=dep-info,link -C prefer-dynamic -C debuginfo=2 -C metadata=491092fa228c9ab3 -C extra-filename=-491092fa228c9ab3 --out-dir /home/cratesfyi/cratesfyi/debug/deps -L dependency=/home/cratesfyi/cratesfyi/debug/deps --extern libc=/home/cratesfyi/cratesfyi/debug/deps/liblibc-f4ccf2fa58092d85.rlib --extern-version libc=libc,0.2.24 --extern c_vec=/home/cratesfyi/cratesfyi/debug/deps/libc_vec-affd1b4ff3e6e564.so --extern-version c_vec=c_vec,1.0.12 --extern c_vec=/home/cratesfyi/cratesfyi/debug/deps/libc_vec-affd1b4ff3e6e564.rlib --extern-version c_vec=c_vec,1.0.12 --cap-lints allow` Running `rustc --crate-name itertools .cargo/registry/src/github.com-1ecc6299db9ec823/itertools-0.5.10/src/lib.rs --crate-type lib --emit=dep-info,link -C debuginfo=2 -C metadata=0ff44036853e9f7a -C extra-filename=-0ff44036853e9f7a --out-dir /home/cratesfyi/cratesfyi/debug/deps -L dependency=/home/cratesfyi/cratesfyi/debug/deps --extern either=/home/cratesfyi/cratesfyi/debug/deps/libeither-6fd041d6276155b5.rlib --extern-version either=either,1.1.0 --cap-lints allow` Fresh itertools-num v0.1.1 Fresh serde_derive v1.0.9 Fresh serde v1.0.9 Fresh unreachable v0.1.1 Fresh ordered-float v0.5.0 Compiling itertools v0.6.0 Running `rustc --crate-name itertools .cargo/registry/src/github.com-1ecc6299db9ec823/itertools-0.6.0/src/lib.rs --crate-type lib --emit=dep-info,link -C debuginfo=2 -C metadata=ef7df43e1955bb8f -C extra-filename=-ef7df43e1955bb8f --out-dir /home/cratesfyi/cratesfyi/debug/deps -L dependency=/home/cratesfyi/cratesfyi/debug/deps --extern either=/home/cratesfyi/cratesfyi/debug/deps/libeither-6fd041d6276155b5.rlib --extern-version either=either,1.1.0 --cap-lints allow` Fresh newtype_derive v0.1.6 Fresh rand v0.3.15 Compiling statrs v0.6.0 Fresh num-iter v0.1.33 Running `rustc --crate-name statrs .cargo/registry/src/github.com-1ecc6299db9ec823/statrs-0.6.0/src/lib.rs --crate-type lib --emit=dep-info,link -C debuginfo=2 -C metadata=6cdf01f469b08257 -C extra-filename=-6cdf01f469b08257 --out-dir /home/cratesfyi/cratesfyi/debug/deps -L dependency=/home/cratesfyi/cratesfyi/debug/deps --extern rand=/home/cratesfyi/cratesfyi/debug/deps/librand-76456d761c2cb637.rlib --extern-version rand=rand,0.3.15 --cap-lints allow` Fresh csv v0.15.0 Compiling multimap v0.4.0 Fresh num v0.1.39 Running `rustc --crate-name multimap .cargo/registry/src/github.com-1ecc6299db9ec823/multimap-0.4.0/src/lib.rs --crate-type lib --emit=dep-info,link -C debuginfo=2 --cfg 'feature="serde_impl"' --cfg 'feature="serde"' --cfg 'feature="default"' -C metadata=80746fd912c4b40f -C extra-filename=-80746fd912c4b40f --out-dir /home/cratesfyi/cratesfyi/debug/deps -L dependency=/home/cratesfyi/cratesfyi/debug/deps --extern serde=/home/cratesfyi/cratesfyi/debug/deps/libserde-8121d6fd0835bab3.rlib --extern-version serde=serde,1.0.9 --cap-lints allow` Compiling vec_map v0.8.0 Fresh matrixmultiply v0.1.13 Compiling rulinalg v0.2.2 Fresh log v0.3.8 Running `rustc --crate-name vec_map .cargo/registry/src/github.com-1ecc6299db9ec823/vec_map-0.8.0/src/lib.rs --crate-type lib --emit=dep-info,link -C debuginfo=2 --cfg 'feature="serde_derive"' --cfg 'feature="serde"' --cfg 'feature="eders"' -C metadata=d1fcf7ed3dea720d -C extra-filename=-d1fcf7ed3dea720d --out-dir /home/cratesfyi/cratesfyi/debug/deps -L dependency=/home/cratesfyi/cratesfyi/debug/deps --extern serde_derive=/home/cratesfyi/cratesfyi/debug/deps/libserde_derive-355c001ddc7ee13f.so --extern-version serde_derive=serde_derive,1.0.9 --extern serde=/home/cratesfyi/cratesfyi/debug/deps/libserde-8121d6fd0835bab3.rlib --extern-version serde=serde,1.0.9 --cap-lints allow` Running `rustc --crate-name rulinalg .cargo/registry/src/github.com-1ecc6299db9ec823/rulinalg-0.2.2/src/lib.rs --crate-type lib --emit=dep-info,link -C debuginfo=2 -C metadata=440da05db547a807 -C extra-filename=-440da05db547a807 --out-dir /home/cratesfyi/cratesfyi/debug/deps -L dependency=/home/cratesfyi/cratesfyi/debug/deps --extern matrixmultiply=/home/cratesfyi/cratesfyi/debug/deps/libmatrixmultiply-15da98a76667faf3.rlib --extern-version matrixmultiply=matrixmultiply,0.1.13 --extern num=/home/cratesfyi/cratesfyi/debug/deps/libnum-0a20d6660d4af732.rlib --extern-version num=num,0.1.39 --cap-lints allow` Compiling ndarray v0.9.1 Compiling rust-htslib v0.12.1 Running `rustc --crate-name rust_htslib .cargo/registry/src/github.com-1ecc6299db9ec823/rust-htslib-0.12.1/src/lib.rs --crate-type lib --emit=dep-info,link -C debuginfo=2 -C metadata=c221ec7c83405d68 -C extra-filename=-c221ec7c83405d68 --out-dir /home/cratesfyi/cratesfyi/debug/deps -L dependency=/home/cratesfyi/cratesfyi/debug/deps --extern custom_derive=/home/cratesfyi/cratesfyi/debug/deps/libcustom_derive-8ee9808c533a1523.rlib --extern-version custom_derive=custom_derive,0.1.7 --extern quick_error=/home/cratesfyi/cratesfyi/debug/deps/libquick_error-37884a8127b8d022.rlib --extern-version quick_error=quick-error,1.2.0 --extern bitflags=/home/cratesfyi/cratesfyi/debug/deps/libbitflags-c8b3e4b415593713.rlib --extern-version bitflags=bitflags,0.9.1 --extern lazy_static=/home/cratesfyi/cratesfyi/debug/deps/liblazy_static-18005fa1be5dd889.rlib --extern-version lazy_static=lazy_static,0.2.8 --extern newtype_derive=/home/cratesfyi/cratesfyi/debug/deps/libnewtype_derive-cf92eeb8369086aa.rlib --extern-version newtype_derive=newtype_derive,0.1.6 --extern url=/home/cratesfyi/cratesfyi/debug/deps/liburl-48548ecad34cbebc.rlib --extern-version url=url,1.5.1 --extern libc=/home/cratesfyi/cratesfyi/debug/deps/liblibc-f4ccf2fa58092d85.rlib --extern-version libc=libc,0.2.24 --extern itertools=/home/cratesfyi/cratesfyi/debug/deps/libitertools-ef7df43e1955bb8f.rlib --extern-version itertools=itertools,0.6.0 --extern ieee754=/home/cratesfyi/cratesfyi/debug/deps/libieee754-d73764299ded6e5e.rlib --extern-version ieee754=ieee754,0.2.2 --cap-lints allow -L /home/cratesfyi/.cargo/registry/src/github.com-1ecc6299db9ec823/rust-htslib-0.12.1/htslib -l static=hts -l z` Running `rustc --crate-name ndarray .cargo/registry/src/github.com-1ecc6299db9ec823/ndarray-0.9.1/src/lib.rs --crate-type lib --emit=dep-info,link -C debuginfo=2 -C metadata=39fc6894846445f6 -C extra-filename=-39fc6894846445f6 --out-dir /home/cratesfyi/cratesfyi/debug/deps -L dependency=/home/cratesfyi/cratesfyi/debug/deps --extern num_traits=/home/cratesfyi/cratesfyi/debug/deps/libnum_traits-32c57ec3799391e2.rlib --extern-version num_traits=num-traits,0.1.39 --extern num_complex=/home/cratesfyi/cratesfyi/debug/deps/libnum_complex-a7c7748c024fc953.rlib --extern-version num_complex=num-complex,0.1.38 --extern matrixmultiply=/home/cratesfyi/cratesfyi/debug/deps/libmatrixmultiply-15da98a76667faf3.rlib --extern-version matrixmultiply=matrixmultiply,0.1.13 --extern itertools=/home/cratesfyi/cratesfyi/debug/deps/libitertools-ef7df43e1955bb8f.rlib --extern-version itertools=itertools,0.6.0 --cap-lints allow` Compiling ndarray v0.6.10 Running `rustc --crate-name ndarray .cargo/registry/src/github.com-1ecc6299db9ec823/ndarray-0.6.10/src/lib.rs --crate-type lib --emit=dep-info,link -C debuginfo=2 -C metadata=e55462cde3c3d72c -C extra-filename=-e55462cde3c3d72c --out-dir /home/cratesfyi/cratesfyi/debug/deps -L dependency=/home/cratesfyi/cratesfyi/debug/deps --extern matrixmultiply=/home/cratesfyi/cratesfyi/debug/deps/libmatrixmultiply-15da98a76667faf3.rlib --extern-version matrixmultiply=matrixmultiply,0.1.13 --extern num_traits=/home/cratesfyi/cratesfyi/debug/deps/libnum_traits-32c57ec3799391e2.rlib --extern-version num_traits=num-traits,0.1.39 --extern itertools=/home/cratesfyi/cratesfyi/debug/deps/libitertools-0ff44036853e9f7a.rlib --extern-version itertools=itertools,0.5.10 --extern num_complex=/home/cratesfyi/cratesfyi/debug/deps/libnum_complex-a7c7748c024fc953.rlib --extern-version num_complex=num-complex,0.1.38 --cap-lints allow` Compiling rusty-machine v0.4.4 Running `rustc --crate-name rusty_machine .cargo/registry/src/github.com-1ecc6299db9ec823/rusty-machine-0.4.4/src/lib.rs --crate-type lib --emit=dep-info,link -C debuginfo=2 -C metadata=2a4cfcb2a9382a06 -C extra-filename=-2a4cfcb2a9382a06 --out-dir /home/cratesfyi/cratesfyi/debug/deps -L dependency=/home/cratesfyi/cratesfyi/debug/deps --extern rand=/home/cratesfyi/cratesfyi/debug/deps/librand-76456d761c2cb637.rlib --extern-version rand=rand,0.3.15 --extern num=/home/cratesfyi/cratesfyi/debug/deps/libnum-0a20d6660d4af732.rlib --extern-version num=num,0.1.39 --extern rulinalg=/home/cratesfyi/cratesfyi/debug/deps/librulinalg-440da05db547a807.rlib --extern-version rulinalg=rulinalg,0.2.2 --cap-lints allow` Compiling bio v0.14.1 Running `rustc --crate-name bio .cargo/registry/src/github.com-1ecc6299db9ec823/bio-0.14.1/src/lib.rs --crate-type lib --emit=dep-info,link -C debuginfo=2 -C metadata=7984e022017d2f08 -C extra-filename=-7984e022017d2f08 --out-dir /home/cratesfyi/cratesfyi/debug/deps -L dependency=/home/cratesfyi/cratesfyi/debug/deps --extern serde=/home/cratesfyi/cratesfyi/debug/deps/libserde-8121d6fd0835bab3.rlib --extern-version serde=serde,1.0.9 --extern newtype_derive=/home/cratesfyi/cratesfyi/debug/deps/libnewtype_derive-cf92eeb8369086aa.rlib --extern-version newtype_derive=newtype_derive,0.1.6 --extern regex=/home/cratesfyi/cratesfyi/debug/deps/libregex-f57600d45f59abf1.rlib --extern-version regex=regex,0.2.2 --extern serde_derive=/home/cratesfyi/cratesfyi/debug/deps/libserde_derive-355c001ddc7ee13f.so --extern-version serde_derive=serde_derive,1.0.9 --extern vec_map=/home/cratesfyi/cratesfyi/debug/deps/libvec_map-d1fcf7ed3dea720d.rlib --extern-version vec_map=vec_map,0.8.0 --extern itertools=/home/cratesfyi/cratesfyi/debug/deps/libitertools-ef7df43e1955bb8f.rlib --extern-version itertools=itertools,0.6.0 --extern num_integer=/home/cratesfyi/cratesfyi/debug/deps/libnum_integer-dad7e7932a5f6c81.rlib --extern-version num_integer=num-integer,0.1.34 --extern num_traits=/home/cratesfyi/cratesfyi/debug/deps/libnum_traits-32c57ec3799391e2.rlib --extern-version num_traits=num-traits,0.1.39 --extern approx=/home/cratesfyi/cratesfyi/debug/deps/libapprox-d684018f72847872.rlib --extern-version approx=approx,0.1.1 --extern bit_set=/home/cratesfyi/cratesfyi/debug/deps/libbit_set-ef856a90579007dc.rlib --extern-version bit_set=bit-set,0.4.0 --extern ordered_float=/home/cratesfyi/cratesfyi/debug/deps/libordered_float-75000708242d7f3f.rlib --extern-version ordered_float=ordered-float,0.5.0 --extern itertools_num=/home/cratesfyi/cratesfyi/debug/deps/libitertools_num-dfe59748eb2ff28b.rlib --extern-version itertools_num=itertools-num,0.1.1 --extern multimap=/home/cratesfyi/cratesfyi/debug/deps/libmultimap-80746fd912c4b40f.rlib --extern-version multimap=multimap,0.4.0 --extern csv=/home/cratesfyi/cratesfyi/debug/deps/libcsv-4cd5d2a7bdd971e1.rlib --extern-version csv=csv,0.15.0 --extern quick_error=/home/cratesfyi/cratesfyi/debug/deps/libquick_error-37884a8127b8d022.rlib --extern-version quick_error=quick-error,1.2.0 --extern lazy_static=/home/cratesfyi/cratesfyi/debug/deps/liblazy_static-18005fa1be5dd889.rlib --extern-version lazy_static=lazy_static,0.2.8 --extern rustc_serialize=/home/cratesfyi/cratesfyi/debug/deps/librustc_serialize-d05828e9f8a2cc23.rlib --extern-version rustc_serialize=rustc-serialize,0.3.24 --extern bit_vec=/home/cratesfyi/cratesfyi/debug/deps/libbit_vec-ef3ebf616c9e2481.rlib --extern-version bit_vec=bit-vec,0.4.4 --extern ndarray=/home/cratesfyi/cratesfyi/debug/deps/libndarray-39fc6894846445f6.rlib --extern-version ndarray=ndarray,0.9.1 --extern custom_derive=/home/cratesfyi/cratesfyi/debug/deps/libcustom_derive-8ee9808c533a1523.rlib --extern-version custom_derive=custom_derive,0.1.7 --cap-lints allow` Documenting libprosic v0.4.0 Running `rustdoc --crate-name libprosic .cargo/registry/src/github.com-1ecc6299db9ec823/libprosic-0.4.0/src/lib.rs -o /home/cratesfyi/cratesfyi/doc --cfg 'feature="default"' -L dependency=/home/cratesfyi/cratesfyi/debug/deps --extern csv=/home/cratesfyi/cratesfyi/debug/deps/libcsv-4cd5d2a7bdd971e1.rlib --extern-version csv=csv,0.15.0 --extern ndarray=/home/cratesfyi/cratesfyi/debug/deps/libndarray-e55462cde3c3d72c.rlib --extern-version ndarray=ndarray,0.6.10 --extern statrs=/home/cratesfyi/cratesfyi/debug/deps/libstatrs-6cdf01f469b08257.rlib --extern-version statrs=statrs,0.6.0 --extern rusty_machine=/home/cratesfyi/cratesfyi/debug/deps/librusty_machine-2a4cfcb2a9382a06.rlib --extern-version rusty_machine=rusty-machine,0.4.4 --extern approx=/home/cratesfyi/cratesfyi/debug/deps/libapprox-d684018f72847872.rlib --extern-version approx=approx,0.1.1 --extern rust_htslib=/home/cratesfyi/cratesfyi/debug/deps/librust_htslib-c221ec7c83405d68.rlib --extern-version rust_htslib=rust-htslib,0.12.1 --extern itertools_num=/home/cratesfyi/cratesfyi/debug/deps/libitertools_num-dfe59748eb2ff28b.rlib --extern-version itertools_num=itertools-num,0.1.1 --extern lazy_static=/home/cratesfyi/cratesfyi/debug/deps/liblazy_static-18005fa1be5dd889.rlib --extern-version lazy_static=lazy_static,0.2.8 --extern bio=/home/cratesfyi/cratesfyi/debug/deps/libbio-7984e022017d2f08.rlib --extern-version bio=bio,0.14.1 --extern rustc_serialize=/home/cratesfyi/cratesfyi/debug/deps/librustc_serialize-d05828e9f8a2cc23.rlib --extern-version rustc_serialize=rustc-serialize,0.3.24 --extern ordered_float=/home/cratesfyi/cratesfyi/debug/deps/libordered_float-75000708242d7f3f.rlib --extern-version ordered_float=ordered-float,0.5.0 --extern log=/home/cratesfyi/cratesfyi/debug/deps/liblog-4cfe391024f1467d.rlib --extern-version log=log,0.3.8 --extern rgsl=/home/cratesfyi/cratesfyi/debug/deps/librgsl-491092fa228c9ab3.so --extern-version rgsl=GSL,0.4.31 --extern rgsl=/home/cratesfyi/cratesfyi/debug/deps/librgsl-491092fa228c9ab3.rlib --extern-version rgsl=GSL,0.4.31 --extern quick_error=/home/cratesfyi/cratesfyi/debug/deps/libquick_error-37884a8127b8d022.rlib --extern-version quick_error=quick-error,1.2.0 --extern itertools=/home/cratesfyi/cratesfyi/debug/deps/libitertools-ef7df43e1955bb8f.rlib --extern-version itertools=itertools,0.6.0` Finished dev [unoptimized + debuginfo] target(s) in 18.77 secs