1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
//! A problem based on the benchmark described in [Tabular Benchmarks for Joint Architecture and Hyperparameter Optimization][paper].
//!
//! [paper]: https://arxiv.org/abs/1905.04970
use hdf5file::{self, DataObject, Hdf5File};
use kurobako_core::domain;
use kurobako_core::problem::{
    Evaluator, Problem, ProblemFactory, ProblemRecipe, ProblemSpec, ProblemSpecBuilder,
};
use kurobako_core::registry::FactoryRegistry;
use kurobako_core::rng::{ArcRng, Rng};
use kurobako_core::trial::{Params, Values};
use kurobako_core::{Error, ErrorKind, Result};
use serde::{Deserialize, Serialize};
use std::f64;
use std::path::PathBuf;
use std::sync::{Arc, Mutex};
use structopt::StructOpt;
use trackable::error::ErrorKindExt as _;

/// Recipe of `HpobenchProblem`.
#[derive(Debug, Clone, StructOpt, Serialize, Deserialize)]
#[structopt(rename_all = "kebab-case")]
pub struct HpobenchProblemRecipe {
    /// Path of the FC-Net dataset.
    pub dataset: PathBuf,
}
impl ProblemRecipe for HpobenchProblemRecipe {
    type Factory = HpobenchProblemFactory;

    fn create_factory(&self, _registry: &FactoryRegistry) -> Result<Self::Factory> {
        let file = track!(Hdf5File::open_file(&self.dataset).map_err(into_error))?;
        Ok(HpobenchProblemFactory {
            file: Arc::new(Mutex::new(file)),
            path: self.dataset.clone(),
        })
    }
}

/// Factory of `HpobenchProblem`.
#[derive(Debug)]
pub struct HpobenchProblemFactory {
    file: Arc<Mutex<Hdf5File>>,
    path: PathBuf,
}
impl ProblemFactory for HpobenchProblemFactory {
    type Problem = HpobenchProblem;

    fn specification(&self) -> Result<ProblemSpec> {
        let name = track_assert_some!(
            self.path.file_stem().and_then(|n| n.to_str()),
            ErrorKind::InvalidInput
        );
        let name = match name {
            "fcnet_naval_propulsion_data" => "HPO-Bench-Naval",
            "fcnet_parkinsons_telemonitoring_data" => "HPO-Bench-Parkinson",
            "fcnet_protein_structure_data" => "HPO-Bench-Protein",
            "fcnet_slice_localization_data" => "HPO-Bench-Slice",
            _ => name,
        };

        let spec = ProblemSpecBuilder::new(name)
            .attr(
                "version",
                &format!("kurobako_problems={}", env!("CARGO_PKG_VERSION")),
            )
            .attr(
                "paper",
                "Klein, Aaron, and Frank Hutter. \"Tabular Benchmarks \
                 for Joint Architecture and Hyperparameter Optimization.\" \
                 arXiv preprint arXiv:1905.04970 (2019).",
            )
            .attr("github", "https://github.com/automl/nas_benchmarks")
            .param(domain::var("activation_fn_1").categorical(&["tanh", "relu"]))
            .param(domain::var("activation_fn_2").categorical(&["tanh", "relu"]))
            .param(domain::var("batch_size").discrete(0, 4))
            .param(domain::var("dropout_1").discrete(0, 3))
            .param(domain::var("dropout_2").discrete(0, 3))
            .param(domain::var("init_lr").discrete(0, 6))
            .param(domain::var("lr_schedule").categorical(&["cosine", "const"]))
            .param(domain::var("n_units_1").discrete(0, 6))
            .param(domain::var("n_units_2").discrete(0, 6))
            .value(domain::var("Validation MSE").continuous(0.0, f64::INFINITY))
            .steps(1..=100);

        track!(spec.finish())
    }

    fn create_problem(&self, rng: ArcRng) -> Result<Self::Problem> {
        Ok(HpobenchProblem {
            file: Arc::clone(&self.file),
            rng,
        })
    }
}

/// FC-Net problem.
#[derive(Debug)]
pub struct HpobenchProblem {
    file: Arc<Mutex<Hdf5File>>,
    rng: ArcRng,
}
impl Problem for HpobenchProblem {
    type Evaluator = HpobenchEvaluator;

    fn create_evaluator(&self, params: Params) -> Result<Self::Evaluator> {
        const UNITS: [usize; 6] = [16, 32, 64, 128, 256, 512];
        const DROPOUTS: [&str; 3] = ["0.0", "0.3", "0.6"];

        let key = format!(
            r#"{{"activation_fn_1": {:?}, "activation_fn_2": {:?}, "batch_size": {}, "dropout_1": {}, "dropout_2": {}, "init_lr": {}, "lr_schedule": {:?}, "n_units_1": {}, "n_units_2": {}}}"#,
            (["tanh", "relu"])[params[0] as usize],
            (["tanh", "relu"])[params[1] as usize],
            ([8, 16, 32, 64])[params[2] as usize],
            DROPOUTS[params[3] as usize],
            DROPOUTS[params[4] as usize],
            ([5.0 * 1e-4, 1e-3, 5.0 * 1e-3, 1e-2, 5.0 * 1e-2, 1e-1])[params[5] as usize],
            (["cosine", "const"])[params[6] as usize],
            UNITS[params[7] as usize],
            UNITS[params[8] as usize]
        );

        let sample_index = track!(self.rng.with_lock(|rng| rng.gen::<usize>() % 4))?;
        Ok(HpobenchEvaluator {
            file: Arc::clone(&self.file),
            key: format!("/{}/valid_mse", key),
            sample_index,
        })
    }
}

/// Evaluator of `HpobenchProblem`.
#[derive(Debug)]
pub struct HpobenchEvaluator {
    file: Arc<Mutex<Hdf5File>>,
    key: String,
    sample_index: usize,
}
impl Evaluator for HpobenchEvaluator {
    fn evaluate(&mut self, next_step: u64) -> Result<(u64, Values)> {
        let mut file = track!(self.file.lock().map_err(Error::from))?;
        let data = track!(file.get_object(&self.key).map_err(into_error))?;
        let DataObject::Float(data) = track_assert_some!(data, ErrorKind::InvalidInput; self.key);

        let value = data[[self.sample_index, next_step as usize - 1]];
        Ok((next_step, Values::new(vec![value])))
    }
}

fn into_error(e: hdf5file::Error) -> Error {
    ErrorKind::Other.takes_over(e).into()
}