Struct google_genomics1::VariantAnnotation

pub struct VariantAnnotation {
    pub transcript_ids: Option<Vec<String>>,
    pub alternate_bases: Option<String>,
    pub clinical_significance: Option<String>,
    pub conditions: Option<Vec<ClinicalCondition>>,
    pub type_: Option<String>,
    pub effect: Option<String>,
    pub gene_id: Option<String>,
}

There is no detailed description.

This type is not used in any activity, and only used as part of another schema.

Fields

transcript_ids: Option<Vec<String>>

Google annotation IDs of the transcripts affected by this variant. These should be provided when the variant is created.

alternate_bases: Option<String>

The alternate allele for this variant. If multiple alternate alleles exist at this location, create a separate variant for each one, as they may represent distinct conditions.

clinical_significance: Option<String>

Describes the clinical significance of a variant. It is adapted from the ClinVar controlled vocabulary for clinical significance described at: http://www.ncbi.nlm.nih.gov/clinvar/docs/clinsig/

conditions: Option<Vec<ClinicalCondition>>

The set of conditions associated with this variant. A condition describes the way a variant influences human health.

type_: Option<String>

Type has been adapted from ClinVar's list of variant types.

effect: Option<String>

Effect of the variant on the coding sequence.

gene_id: Option<String>

Google annotation ID of the gene affected by this variant. This should be provided when the variant is created.

Trait Implementations

impl Default for VariantAnnotation

fn default() -> VariantAnnotation

Returns the "default value" for a type.

impl Clone for VariantAnnotation

fn clone(&self) -> VariantAnnotation

Returns a copy of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for VariantAnnotation

fn fmt(&self, f: &mut Formatter) -> Result

Formats the value using the given formatter.

impl Part for VariantAnnotation