Struct genome::DNA

pub struct DNA {
    pub pool_size: u16,
    pub gene_size: u16,
    pub genes: Vec<Gene>,
}

Fields

pool_size: u16

gene_size: u16

genes: Vec<Gene>

Implementations

impl DNA

pub fn new(pool_size: u16, gene_size: u16) -> DNA

Constructs a new DNA.

Examples

use genome::DNA;

let dna = DNA::new(2, 2);

pub fn is_valid(dna_str: String) -> bool

Check if current DNA string is valid.

Examples

use genome::DNA;
let dna = DNA::new(2, 2);

let is_valid = DNA::is_valid(dna.to_string());

pub fn merge(left_dna: DNA, right_dna: DNA, mutate: bool) -> Option<DNA>

Merge two DNA into one

Examples

use genome::DNA;

let dna1 = DNA::new(2, 2);
let dna2 = DNA::new(2, 2);

let merged = DNA::merge(dna1, dna2, false);

pub fn compare(left_dna: DNA, right_dna: DNA) -> f64

Compare two DNA similarity, return the percentage of same genes

Examples

use genome::DNA;

let dna1 = DNA::new(256, 2);
let dna_str = dna1.to_string();
let dna2 = DNA::new(256, 2);

let merged = DNA::merge(dna1, dna2, false).unwrap();

let is_parent = DNA::compare(DNA::from(dna_str), merged) > 0.3;

pub fn to_latent_vec(&self) -> Vec<f32>

Convert DNA to GAN latent vector

Examples

use genome::DNA;

let dna1 = DNA::new(2, 2);

let latent = dna1.to_latent_vec();

pub fn to_string(&self) -> String

Convert DNA to string

Examples

use genome::DNA;

let dna1 = DNA::new(2, 2);

let dna1_str = dna1.to_string();

pub fn get_sum(&self) -> f32

Get checksum for the dna, return back f32 sum of all genes.

Examples

use genome::DNA;

let dna1 = DNA::new(2, 2);

let dna1_str = dna1.get_sum();

Trait Implementations

impl From<DNA> for String

Convert DNA to string

Examples

use genome::DNA;

let dna1 = DNA::new(2, 2);

let dna1_str = String::from(dna1);

fn from(dna: DNA) -> String

Performs the conversion.

impl From<String> for DNA

Convert DNA to string

Examples

use genome::DNA;

let dna1 = DNA::new(2, 2);
let dna1_str = dna1.to_string();

let dna_copy = DNA::from(dna1_str);

fn from(dna: String) -> DNA

Performs the conversion.