Module fmlrc::ropebwt2_util

Contains wrapper functions for ropebwt2, most will fail if ropebwt2 is not on the PATH

Functions

create_bwt_from_strings	Wrapper function for using ropebwt2 with collection of strings. This is primarily for performing easy tests within the Rust environment. For production, we recommend running the ropebwt2 command separately. IMPORTANT: This requires that ropebwt2 is installed locally and on the PATH.
stream_bwt_from_fastqs	Wrapper function for using ropebwt2 with a collection of gzipped FASTQ files. Returns a streamable result from the ropebwt2 command.