[−][src]Module fmlrc::bwt_converter
Contains the function for reformating a BWT string into the expected run-length format or numpy file
Constants
| COUNT_MASK | Contains the right-shifted number mask |
| LETTER_BITS | The number of bits for storing the character in a byte |
| MASK | Contains the character mask |
| NUMBER_BITS | The number of bit for storing quantity in a byte |
| NUM_POWER | Multiplier for multi-byte runs |
| VC_LEN | The number of characters in our alphabet |
Functions
| convert_to_vec | this function will convert a stream of characters into the compressed vector representation |
| save_bwt_numpy | This will take some iterable byte array and save it to a file in numpy format. This primarily adds a numpy data type and shape fields that occupies the first 96 bytes of the file. The intended use is to pass in a compressed BWT for saving them, but really any byte array can be stored this way. |