pub mod min_hash {
#[derive(Copy, Clone)]
pub struct Owned(());
impl <'a> ::capnp::traits::Owned<'a> for Owned { type Reader = Reader<'a>; type Builder = Builder<'a>; }
impl <'a> ::capnp::traits::OwnedStruct<'a> for Owned { type Reader = Reader<'a>; type Builder = Builder<'a>; }
impl ::capnp::traits::Pipelined for Owned { type Pipeline = Pipeline; }
#[derive(Clone, Copy)]
pub struct Reader<'a> { reader: ::capnp::private::layout::StructReader<'a> }
impl <'a,> ::capnp::traits::HasTypeId for Reader<'a,> {
#[inline]
fn type_id() -> u64 { _private::TYPE_ID }
}
impl <'a,> ::capnp::traits::FromStructReader<'a> for Reader<'a,> {
fn new(reader: ::capnp::private::layout::StructReader<'a>) -> Reader<'a,> {
Reader { reader, }
}
}
impl <'a,> ::capnp::traits::FromPointerReader<'a> for Reader<'a,> {
fn get_from_pointer(reader: &::capnp::private::layout::PointerReader<'a>, default: ::core::option::Option<&'a [capnp::Word]>) -> ::capnp::Result<Reader<'a,>> {
::core::result::Result::Ok(::capnp::traits::FromStructReader::new(reader.get_struct(default)?))
}
}
impl <'a,> ::capnp::traits::IntoInternalStructReader<'a> for Reader<'a,> {
fn into_internal_struct_reader(self) -> ::capnp::private::layout::StructReader<'a> {
self.reader
}
}
impl <'a,> ::capnp::traits::Imbue<'a> for Reader<'a,> {
fn imbue(&mut self, cap_table: &'a ::capnp::private::layout::CapTable) {
self.reader.imbue(::capnp::private::layout::CapTableReader::Plain(cap_table))
}
}
impl <'a,> Reader<'a,> {
pub fn reborrow(&self) -> Reader<'_,> {
Reader { .. *self }
}
pub fn total_size(&self) -> ::capnp::Result<::capnp::MessageSize> {
self.reader.total_size()
}
#[inline]
pub fn get_kmer_size(self) -> u32 {
self.reader.get_data_field::<u32>(0)
}
#[inline]
pub fn get_window_size(self) -> u32 {
self.reader.get_data_field::<u32>(1)
}
#[inline]
pub fn get_min_hashes_per_window(self) -> u32 {
self.reader.get_data_field::<u32>(2)
}
#[inline]
pub fn get_concatenated(self) -> bool {
self.reader.get_bool_field(96)
}
#[inline]
pub fn get_reference_list_old(self) -> ::capnp::Result<crate::serialization::mash_capnp::min_hash::reference_list::Reader<'a>> {
::capnp::traits::FromPointerReader::get_from_pointer(&self.reader.get_pointer_field(0), ::core::option::Option::None)
}
pub fn has_reference_list_old(&self) -> bool {
!self.reader.get_pointer_field(0).is_null()
}
#[inline]
pub fn get_locus_list(self) -> ::capnp::Result<crate::serialization::mash_capnp::min_hash::locus_list::Reader<'a>> {
::capnp::traits::FromPointerReader::get_from_pointer(&self.reader.get_pointer_field(1), ::core::option::Option::None)
}
pub fn has_locus_list(&self) -> bool {
!self.reader.get_pointer_field(1).is_null()
}
#[inline]
pub fn get_error(self) -> f32 {
self.reader.get_data_field::<f32>(4)
}
#[inline]
pub fn get_noncanonical(self) -> bool {
self.reader.get_bool_field(97)
}
#[inline]
pub fn get_alphabet(self) -> ::capnp::Result<::capnp::text::Reader<'a>> {
::capnp::traits::FromPointerReader::get_from_pointer(&self.reader.get_pointer_field(2), ::core::option::Option::None)
}
pub fn has_alphabet(&self) -> bool {
!self.reader.get_pointer_field(2).is_null()
}
#[inline]
pub fn get_preserve_case(self) -> bool {
self.reader.get_bool_field(98)
}
#[inline]
pub fn get_hash_seed(self) -> u32 {
self.reader.get_data_field_mask::<u32>(5, 42)
}
#[inline]
pub fn get_reference_list(self) -> ::capnp::Result<crate::serialization::mash_capnp::min_hash::reference_list::Reader<'a>> {
::capnp::traits::FromPointerReader::get_from_pointer(&self.reader.get_pointer_field(3), ::core::option::Option::None)
}
pub fn has_reference_list(&self) -> bool {
!self.reader.get_pointer_field(3).is_null()
}
}
pub struct Builder<'a> { builder: ::capnp::private::layout::StructBuilder<'a> }
impl <'a,> ::capnp::traits::HasStructSize for Builder<'a,> {
#[inline]
fn struct_size() -> ::capnp::private::layout::StructSize { _private::STRUCT_SIZE }
}
impl <'a,> ::capnp::traits::HasTypeId for Builder<'a,> {
#[inline]
fn type_id() -> u64 { _private::TYPE_ID }
}
impl <'a,> ::capnp::traits::FromStructBuilder<'a> for Builder<'a,> {
fn new(builder: ::capnp::private::layout::StructBuilder<'a>) -> Builder<'a, > {
Builder { builder, }
}
}
impl <'a,> ::capnp::traits::ImbueMut<'a> for Builder<'a,> {
fn imbue_mut(&mut self, cap_table: &'a mut ::capnp::private::layout::CapTable) {
self.builder.imbue(::capnp::private::layout::CapTableBuilder::Plain(cap_table))
}
}
impl <'a,> ::capnp::traits::FromPointerBuilder<'a> for Builder<'a,> {
fn init_pointer(builder: ::capnp::private::layout::PointerBuilder<'a>, _size: u32) -> Builder<'a,> {
::capnp::traits::FromStructBuilder::new(builder.init_struct(_private::STRUCT_SIZE))
}
fn get_from_pointer(builder: ::capnp::private::layout::PointerBuilder<'a>, default: ::core::option::Option<&'a [capnp::Word]>) -> ::capnp::Result<Builder<'a,>> {
::core::result::Result::Ok(::capnp::traits::FromStructBuilder::new(builder.get_struct(_private::STRUCT_SIZE, default)?))
}
}
impl <'a,> ::capnp::traits::SetPointerBuilder for Reader<'a,> {
fn set_pointer_builder<'b>(pointer: ::capnp::private::layout::PointerBuilder<'b>, value: Reader<'a,>, canonicalize: bool) -> ::capnp::Result<()> { pointer.set_struct(&value.reader, canonicalize) }
}
impl <'a,> Builder<'a,> {
pub fn into_reader(self) -> Reader<'a,> {
::capnp::traits::FromStructReader::new(self.builder.into_reader())
}
pub fn reborrow(&mut self) -> Builder<'_,> {
Builder { .. *self }
}
pub fn reborrow_as_reader(&self) -> Reader<'_,> {
::capnp::traits::FromStructReader::new(self.builder.into_reader())
}
pub fn total_size(&self) -> ::capnp::Result<::capnp::MessageSize> {
self.builder.into_reader().total_size()
}
#[inline]
pub fn get_kmer_size(self) -> u32 {
self.builder.get_data_field::<u32>(0)
}
#[inline]
pub fn set_kmer_size(&mut self, value: u32) {
self.builder.set_data_field::<u32>(0, value);
}
#[inline]
pub fn get_window_size(self) -> u32 {
self.builder.get_data_field::<u32>(1)
}
#[inline]
pub fn set_window_size(&mut self, value: u32) {
self.builder.set_data_field::<u32>(1, value);
}
#[inline]
pub fn get_min_hashes_per_window(self) -> u32 {
self.builder.get_data_field::<u32>(2)
}
#[inline]
pub fn set_min_hashes_per_window(&mut self, value: u32) {
self.builder.set_data_field::<u32>(2, value);
}
#[inline]
pub fn get_concatenated(self) -> bool {
self.builder.get_bool_field(96)
}
#[inline]
pub fn set_concatenated(&mut self, value: bool) {
self.builder.set_bool_field(96, value);
}
#[inline]
pub fn get_reference_list_old(self) -> ::capnp::Result<crate::serialization::mash_capnp::min_hash::reference_list::Builder<'a>> {
::capnp::traits::FromPointerBuilder::get_from_pointer(self.builder.get_pointer_field(0), ::core::option::Option::None)
}
#[inline]
pub fn set_reference_list_old(&mut self, value: crate::serialization::mash_capnp::min_hash::reference_list::Reader<'_>) -> ::capnp::Result<()> {
::capnp::traits::SetPointerBuilder::set_pointer_builder(self.builder.get_pointer_field(0), value, false)
}
#[inline]
pub fn init_reference_list_old(self, ) -> crate::serialization::mash_capnp::min_hash::reference_list::Builder<'a> {
::capnp::traits::FromPointerBuilder::init_pointer(self.builder.get_pointer_field(0), 0)
}
pub fn has_reference_list_old(&self) -> bool {
!self.builder.get_pointer_field(0).is_null()
}
#[inline]
pub fn get_locus_list(self) -> ::capnp::Result<crate::serialization::mash_capnp::min_hash::locus_list::Builder<'a>> {
::capnp::traits::FromPointerBuilder::get_from_pointer(self.builder.get_pointer_field(1), ::core::option::Option::None)
}
#[inline]
pub fn set_locus_list(&mut self, value: crate::serialization::mash_capnp::min_hash::locus_list::Reader<'_>) -> ::capnp::Result<()> {
::capnp::traits::SetPointerBuilder::set_pointer_builder(self.builder.get_pointer_field(1), value, false)
}
#[inline]
pub fn init_locus_list(self, ) -> crate::serialization::mash_capnp::min_hash::locus_list::Builder<'a> {
::capnp::traits::FromPointerBuilder::init_pointer(self.builder.get_pointer_field(1), 0)
}
pub fn has_locus_list(&self) -> bool {
!self.builder.get_pointer_field(1).is_null()
}
#[inline]
pub fn get_error(self) -> f32 {
self.builder.get_data_field::<f32>(4)
}
#[inline]
pub fn set_error(&mut self, value: f32) {
self.builder.set_data_field::<f32>(4, value);
}
#[inline]
pub fn get_noncanonical(self) -> bool {
self.builder.get_bool_field(97)
}
#[inline]
pub fn set_noncanonical(&mut self, value: bool) {
self.builder.set_bool_field(97, value);
}
#[inline]
pub fn get_alphabet(self) -> ::capnp::Result<::capnp::text::Builder<'a>> {
::capnp::traits::FromPointerBuilder::get_from_pointer(self.builder.get_pointer_field(2), ::core::option::Option::None)
}
#[inline]
pub fn set_alphabet(&mut self, value: ::capnp::text::Reader<'_>) {
self.builder.get_pointer_field(2).set_text(value);
}
#[inline]
pub fn init_alphabet(self, size: u32) -> ::capnp::text::Builder<'a> {
self.builder.get_pointer_field(2).init_text(size)
}
pub fn has_alphabet(&self) -> bool {
!self.builder.get_pointer_field(2).is_null()
}
#[inline]
pub fn get_preserve_case(self) -> bool {
self.builder.get_bool_field(98)
}
#[inline]
pub fn set_preserve_case(&mut self, value: bool) {
self.builder.set_bool_field(98, value);
}
#[inline]
pub fn get_hash_seed(self) -> u32 {
self.builder.get_data_field_mask::<u32>(5, 42)
}
#[inline]
pub fn set_hash_seed(&mut self, value: u32) {
self.builder.set_data_field_mask::<u32>(5, value, 42);
}
#[inline]
pub fn get_reference_list(self) -> ::capnp::Result<crate::serialization::mash_capnp::min_hash::reference_list::Builder<'a>> {
::capnp::traits::FromPointerBuilder::get_from_pointer(self.builder.get_pointer_field(3), ::core::option::Option::None)
}
#[inline]
pub fn set_reference_list(&mut self, value: crate::serialization::mash_capnp::min_hash::reference_list::Reader<'_>) -> ::capnp::Result<()> {
::capnp::traits::SetPointerBuilder::set_pointer_builder(self.builder.get_pointer_field(3), value, false)
}
#[inline]
pub fn init_reference_list(self, ) -> crate::serialization::mash_capnp::min_hash::reference_list::Builder<'a> {
::capnp::traits::FromPointerBuilder::init_pointer(self.builder.get_pointer_field(3), 0)
}
pub fn has_reference_list(&self) -> bool {
!self.builder.get_pointer_field(3).is_null()
}
}
pub struct Pipeline { _typeless: ::capnp::any_pointer::Pipeline }
impl ::capnp::capability::FromTypelessPipeline for Pipeline {
fn new(typeless: ::capnp::any_pointer::Pipeline) -> Pipeline {
Pipeline { _typeless: typeless, }
}
}
impl Pipeline {
pub fn get_reference_list_old(&self) -> crate::serialization::mash_capnp::min_hash::reference_list::Pipeline {
::capnp::capability::FromTypelessPipeline::new(self._typeless.get_pointer_field(0))
}
pub fn get_locus_list(&self) -> crate::serialization::mash_capnp::min_hash::locus_list::Pipeline {
::capnp::capability::FromTypelessPipeline::new(self._typeless.get_pointer_field(1))
}
pub fn get_reference_list(&self) -> crate::serialization::mash_capnp::min_hash::reference_list::Pipeline {
::capnp::capability::FromTypelessPipeline::new(self._typeless.get_pointer_field(3))
}
}
mod _private {
use capnp::private::layout;
pub const STRUCT_SIZE: layout::StructSize = layout::StructSize { data: 3, pointers: 4 };
pub const TYPE_ID: u64 = 0xd9d1_6806_af78_2606;
}
pub mod reference_list {
#[derive(Copy, Clone)]
pub struct Owned(());
impl <'a> ::capnp::traits::Owned<'a> for Owned { type Reader = Reader<'a>; type Builder = Builder<'a>; }
impl <'a> ::capnp::traits::OwnedStruct<'a> for Owned { type Reader = Reader<'a>; type Builder = Builder<'a>; }
impl ::capnp::traits::Pipelined for Owned { type Pipeline = Pipeline; }
#[derive(Clone, Copy)]
pub struct Reader<'a> { reader: ::capnp::private::layout::StructReader<'a> }
impl <'a,> ::capnp::traits::HasTypeId for Reader<'a,> {
#[inline]
fn type_id() -> u64 { _private::TYPE_ID }
}
impl <'a,> ::capnp::traits::FromStructReader<'a> for Reader<'a,> {
fn new(reader: ::capnp::private::layout::StructReader<'a>) -> Reader<'a,> {
Reader { reader, }
}
}
impl <'a,> ::capnp::traits::FromPointerReader<'a> for Reader<'a,> {
fn get_from_pointer(reader: &::capnp::private::layout::PointerReader<'a>, default: ::core::option::Option<&'a [capnp::Word]>) -> ::capnp::Result<Reader<'a,>> {
::core::result::Result::Ok(::capnp::traits::FromStructReader::new(reader.get_struct(default)?))
}
}
impl <'a,> ::capnp::traits::IntoInternalStructReader<'a> for Reader<'a,> {
fn into_internal_struct_reader(self) -> ::capnp::private::layout::StructReader<'a> {
self.reader
}
}
impl <'a,> ::capnp::traits::Imbue<'a> for Reader<'a,> {
fn imbue(&mut self, cap_table: &'a ::capnp::private::layout::CapTable) {
self.reader.imbue(::capnp::private::layout::CapTableReader::Plain(cap_table))
}
}
impl <'a,> Reader<'a,> {
pub fn reborrow(&self) -> Reader<'_,> {
Reader { .. *self }
}
pub fn total_size(&self) -> ::capnp::Result<::capnp::MessageSize> {
self.reader.total_size()
}
#[inline]
pub fn get_references(self) -> ::capnp::Result<::capnp::struct_list::Reader<'a,crate::serialization::mash_capnp::min_hash::reference_list::reference::Owned>> {
::capnp::traits::FromPointerReader::get_from_pointer(&self.reader.get_pointer_field(0), ::core::option::Option::None)
}
pub fn has_references(&self) -> bool {
!self.reader.get_pointer_field(0).is_null()
}
}
pub struct Builder<'a> { builder: ::capnp::private::layout::StructBuilder<'a> }
impl <'a,> ::capnp::traits::HasStructSize for Builder<'a,> {
#[inline]
fn struct_size() -> ::capnp::private::layout::StructSize { _private::STRUCT_SIZE }
}
impl <'a,> ::capnp::traits::HasTypeId for Builder<'a,> {
#[inline]
fn type_id() -> u64 { _private::TYPE_ID }
}
impl <'a,> ::capnp::traits::FromStructBuilder<'a> for Builder<'a,> {
fn new(builder: ::capnp::private::layout::StructBuilder<'a>) -> Builder<'a, > {
Builder { builder, }
}
}
impl <'a,> ::capnp::traits::ImbueMut<'a> for Builder<'a,> {
fn imbue_mut(&mut self, cap_table: &'a mut ::capnp::private::layout::CapTable) {
self.builder.imbue(::capnp::private::layout::CapTableBuilder::Plain(cap_table))
}
}
impl <'a,> ::capnp::traits::FromPointerBuilder<'a> for Builder<'a,> {
fn init_pointer(builder: ::capnp::private::layout::PointerBuilder<'a>, _size: u32) -> Builder<'a,> {
::capnp::traits::FromStructBuilder::new(builder.init_struct(_private::STRUCT_SIZE))
}
fn get_from_pointer(builder: ::capnp::private::layout::PointerBuilder<'a>, default: ::core::option::Option<&'a [capnp::Word]>) -> ::capnp::Result<Builder<'a,>> {
::core::result::Result::Ok(::capnp::traits::FromStructBuilder::new(builder.get_struct(_private::STRUCT_SIZE, default)?))
}
}
impl <'a,> ::capnp::traits::SetPointerBuilder for Reader<'a,> {
fn set_pointer_builder<'b>(pointer: ::capnp::private::layout::PointerBuilder<'b>, value: Reader<'a,>, canonicalize: bool) -> ::capnp::Result<()> { pointer.set_struct(&value.reader, canonicalize) }
}
impl <'a,> Builder<'a,> {
pub fn into_reader(self) -> Reader<'a,> {
::capnp::traits::FromStructReader::new(self.builder.into_reader())
}
pub fn reborrow(&mut self) -> Builder<'_,> {
Builder { .. *self }
}
pub fn reborrow_as_reader(&self) -> Reader<'_,> {
::capnp::traits::FromStructReader::new(self.builder.into_reader())
}
pub fn total_size(&self) -> ::capnp::Result<::capnp::MessageSize> {
self.builder.into_reader().total_size()
}
#[inline]
pub fn get_references(self) -> ::capnp::Result<::capnp::struct_list::Builder<'a,crate::serialization::mash_capnp::min_hash::reference_list::reference::Owned>> {
::capnp::traits::FromPointerBuilder::get_from_pointer(self.builder.get_pointer_field(0), ::core::option::Option::None)
}
#[inline]
pub fn set_references(&mut self, value: ::capnp::struct_list::Reader<'a,crate::serialization::mash_capnp::min_hash::reference_list::reference::Owned>) -> ::capnp::Result<()> {
::capnp::traits::SetPointerBuilder::set_pointer_builder(self.builder.get_pointer_field(0), value, false)
}
#[inline]
pub fn init_references(self, size: u32) -> ::capnp::struct_list::Builder<'a,crate::serialization::mash_capnp::min_hash::reference_list::reference::Owned> {
::capnp::traits::FromPointerBuilder::init_pointer(self.builder.get_pointer_field(0), size)
}
pub fn has_references(&self) -> bool {
!self.builder.get_pointer_field(0).is_null()
}
}
pub struct Pipeline { _typeless: ::capnp::any_pointer::Pipeline }
impl ::capnp::capability::FromTypelessPipeline for Pipeline {
fn new(typeless: ::capnp::any_pointer::Pipeline) -> Pipeline {
Pipeline { _typeless: typeless, }
}
}
impl Pipeline {
}
mod _private {
use capnp::private::layout;
pub const STRUCT_SIZE: layout::StructSize = layout::StructSize { data: 0, pointers: 1 };
pub const TYPE_ID: u64 = 0xcf71_219d_02db_7ad0;
}
pub mod reference {
#[derive(Copy, Clone)]
pub struct Owned(());
impl <'a> ::capnp::traits::Owned<'a> for Owned { type Reader = Reader<'a>; type Builder = Builder<'a>; }
impl <'a> ::capnp::traits::OwnedStruct<'a> for Owned { type Reader = Reader<'a>; type Builder = Builder<'a>; }
impl ::capnp::traits::Pipelined for Owned { type Pipeline = Pipeline; }
#[derive(Clone, Copy)]
pub struct Reader<'a> { reader: ::capnp::private::layout::StructReader<'a> }
impl <'a,> ::capnp::traits::HasTypeId for Reader<'a,> {
#[inline]
fn type_id() -> u64 { _private::TYPE_ID }
}
impl <'a,> ::capnp::traits::FromStructReader<'a> for Reader<'a,> {
fn new(reader: ::capnp::private::layout::StructReader<'a>) -> Reader<'a,> {
Reader { reader, }
}
}
impl <'a,> ::capnp::traits::FromPointerReader<'a> for Reader<'a,> {
fn get_from_pointer(reader: &::capnp::private::layout::PointerReader<'a>, default: ::core::option::Option<&'a [capnp::Word]>) -> ::capnp::Result<Reader<'a,>> {
::core::result::Result::Ok(::capnp::traits::FromStructReader::new(reader.get_struct(default)?))
}
}
impl <'a,> ::capnp::traits::IntoInternalStructReader<'a> for Reader<'a,> {
fn into_internal_struct_reader(self) -> ::capnp::private::layout::StructReader<'a> {
self.reader
}
}
impl <'a,> ::capnp::traits::Imbue<'a> for Reader<'a,> {
fn imbue(&mut self, cap_table: &'a ::capnp::private::layout::CapTable) {
self.reader.imbue(::capnp::private::layout::CapTableReader::Plain(cap_table))
}
}
impl <'a,> Reader<'a,> {
pub fn reborrow(&self) -> Reader<'_,> {
Reader { .. *self }
}
pub fn total_size(&self) -> ::capnp::Result<::capnp::MessageSize> {
self.reader.total_size()
}
#[inline]
pub fn get_sequence(self) -> ::capnp::Result<::capnp::text::Reader<'a>> {
::capnp::traits::FromPointerReader::get_from_pointer(&self.reader.get_pointer_field(0), ::core::option::Option::None)
}
pub fn has_sequence(&self) -> bool {
!self.reader.get_pointer_field(0).is_null()
}
#[inline]
pub fn get_quality(self) -> ::capnp::Result<::capnp::text::Reader<'a>> {
::capnp::traits::FromPointerReader::get_from_pointer(&self.reader.get_pointer_field(1), ::core::option::Option::None)
}
pub fn has_quality(&self) -> bool {
!self.reader.get_pointer_field(1).is_null()
}
#[inline]
pub fn get_length(self) -> u32 {
self.reader.get_data_field::<u32>(0)
}
#[inline]
pub fn get_name(self) -> ::capnp::Result<::capnp::text::Reader<'a>> {
::capnp::traits::FromPointerReader::get_from_pointer(&self.reader.get_pointer_field(2), ::core::option::Option::None)
}
pub fn has_name(&self) -> bool {
!self.reader.get_pointer_field(2).is_null()
}
#[inline]
pub fn get_comment(self) -> ::capnp::Result<::capnp::text::Reader<'a>> {
::capnp::traits::FromPointerReader::get_from_pointer(&self.reader.get_pointer_field(3), ::core::option::Option::None)
}
pub fn has_comment(&self) -> bool {
!self.reader.get_pointer_field(3).is_null()
}
#[inline]
pub fn get_hashes32(self) -> ::capnp::Result<::capnp::primitive_list::Reader<'a,u32>> {
::capnp::traits::FromPointerReader::get_from_pointer(&self.reader.get_pointer_field(4), ::core::option::Option::None)
}
pub fn has_hashes32(&self) -> bool {
!self.reader.get_pointer_field(4).is_null()
}
#[inline]
pub fn get_hashes64(self) -> ::capnp::Result<::capnp::primitive_list::Reader<'a,u64>> {
::capnp::traits::FromPointerReader::get_from_pointer(&self.reader.get_pointer_field(5), ::core::option::Option::None)
}
pub fn has_hashes64(&self) -> bool {
!self.reader.get_pointer_field(5).is_null()
}
#[inline]
pub fn get_length64(self) -> u64 {
self.reader.get_data_field::<u64>(1)
}
#[inline]
pub fn get_counts32(self) -> ::capnp::Result<::capnp::primitive_list::Reader<'a,u32>> {
::capnp::traits::FromPointerReader::get_from_pointer(&self.reader.get_pointer_field(6), ::core::option::Option::None)
}
pub fn has_counts32(&self) -> bool {
!self.reader.get_pointer_field(6).is_null()
}
#[inline]
pub fn get_num_valid_kmers(self) -> u64 {
self.reader.get_data_field::<u64>(2)
}
}
pub struct Builder<'a> { builder: ::capnp::private::layout::StructBuilder<'a> }
impl <'a,> ::capnp::traits::HasStructSize for Builder<'a,> {
#[inline]
fn struct_size() -> ::capnp::private::layout::StructSize { _private::STRUCT_SIZE }
}
impl <'a,> ::capnp::traits::HasTypeId for Builder<'a,> {
#[inline]
fn type_id() -> u64 { _private::TYPE_ID }
}
impl <'a,> ::capnp::traits::FromStructBuilder<'a> for Builder<'a,> {
fn new(builder: ::capnp::private::layout::StructBuilder<'a>) -> Builder<'a, > {
Builder { builder, }
}
}
impl <'a,> ::capnp::traits::ImbueMut<'a> for Builder<'a,> {
fn imbue_mut(&mut self, cap_table: &'a mut ::capnp::private::layout::CapTable) {
self.builder.imbue(::capnp::private::layout::CapTableBuilder::Plain(cap_table))
}
}
impl <'a,> ::capnp::traits::FromPointerBuilder<'a> for Builder<'a,> {
fn init_pointer(builder: ::capnp::private::layout::PointerBuilder<'a>, _size: u32) -> Builder<'a,> {
::capnp::traits::FromStructBuilder::new(builder.init_struct(_private::STRUCT_SIZE))
}
fn get_from_pointer(builder: ::capnp::private::layout::PointerBuilder<'a>, default: ::core::option::Option<&'a [capnp::Word]>) -> ::capnp::Result<Builder<'a,>> {
::core::result::Result::Ok(::capnp::traits::FromStructBuilder::new(builder.get_struct(_private::STRUCT_SIZE, default)?))
}
}
impl <'a,> ::capnp::traits::SetPointerBuilder for Reader<'a,> {
fn set_pointer_builder<'b>(pointer: ::capnp::private::layout::PointerBuilder<'b>, value: Reader<'a,>, canonicalize: bool) -> ::capnp::Result<()> { pointer.set_struct(&value.reader, canonicalize) }
}
impl <'a,> Builder<'a,> {
pub fn into_reader(self) -> Reader<'a,> {
::capnp::traits::FromStructReader::new(self.builder.into_reader())
}
pub fn reborrow(&mut self) -> Builder<'_,> {
Builder { .. *self }
}
pub fn reborrow_as_reader(&self) -> Reader<'_,> {
::capnp::traits::FromStructReader::new(self.builder.into_reader())
}
pub fn total_size(&self) -> ::capnp::Result<::capnp::MessageSize> {
self.builder.into_reader().total_size()
}
#[inline]
pub fn get_sequence(self) -> ::capnp::Result<::capnp::text::Builder<'a>> {
::capnp::traits::FromPointerBuilder::get_from_pointer(self.builder.get_pointer_field(0), ::core::option::Option::None)
}
#[inline]
pub fn set_sequence(&mut self, value: ::capnp::text::Reader<'_>) {
self.builder.get_pointer_field(0).set_text(value);
}
#[inline]
pub fn init_sequence(self, size: u32) -> ::capnp::text::Builder<'a> {
self.builder.get_pointer_field(0).init_text(size)
}
pub fn has_sequence(&self) -> bool {
!self.builder.get_pointer_field(0).is_null()
}
#[inline]
pub fn get_quality(self) -> ::capnp::Result<::capnp::text::Builder<'a>> {
::capnp::traits::FromPointerBuilder::get_from_pointer(self.builder.get_pointer_field(1), ::core::option::Option::None)
}
#[inline]
pub fn set_quality(&mut self, value: ::capnp::text::Reader<'_>) {
self.builder.get_pointer_field(1).set_text(value);
}
#[inline]
pub fn init_quality(self, size: u32) -> ::capnp::text::Builder<'a> {
self.builder.get_pointer_field(1).init_text(size)
}
pub fn has_quality(&self) -> bool {
!self.builder.get_pointer_field(1).is_null()
}
#[inline]
pub fn get_length(self) -> u32 {
self.builder.get_data_field::<u32>(0)
}
#[inline]
pub fn set_length(&mut self, value: u32) {
self.builder.set_data_field::<u32>(0, value);
}
#[inline]
pub fn get_name(self) -> ::capnp::Result<::capnp::text::Builder<'a>> {
::capnp::traits::FromPointerBuilder::get_from_pointer(self.builder.get_pointer_field(2), ::core::option::Option::None)
}
#[inline]
pub fn set_name(&mut self, value: ::capnp::text::Reader<'_>) {
self.builder.get_pointer_field(2).set_text(value);
}
#[inline]
pub fn init_name(self, size: u32) -> ::capnp::text::Builder<'a> {
self.builder.get_pointer_field(2).init_text(size)
}
pub fn has_name(&self) -> bool {
!self.builder.get_pointer_field(2).is_null()
}
#[inline]
pub fn get_comment(self) -> ::capnp::Result<::capnp::text::Builder<'a>> {
::capnp::traits::FromPointerBuilder::get_from_pointer(self.builder.get_pointer_field(3), ::core::option::Option::None)
}
#[inline]
pub fn set_comment(&mut self, value: ::capnp::text::Reader<'_>) {
self.builder.get_pointer_field(3).set_text(value);
}
#[inline]
pub fn init_comment(self, size: u32) -> ::capnp::text::Builder<'a> {
self.builder.get_pointer_field(3).init_text(size)
}
pub fn has_comment(&self) -> bool {
!self.builder.get_pointer_field(3).is_null()
}
#[inline]
pub fn get_hashes32(self) -> ::capnp::Result<::capnp::primitive_list::Builder<'a,u32>> {
::capnp::traits::FromPointerBuilder::get_from_pointer(self.builder.get_pointer_field(4), ::core::option::Option::None)
}
#[inline]
pub fn set_hashes32(&mut self, value: ::capnp::primitive_list::Reader<'a,u32>) -> ::capnp::Result<()> {
::capnp::traits::SetPointerBuilder::set_pointer_builder(self.builder.get_pointer_field(4), value, false)
}
#[inline]
pub fn init_hashes32(self, size: u32) -> ::capnp::primitive_list::Builder<'a,u32> {
::capnp::traits::FromPointerBuilder::init_pointer(self.builder.get_pointer_field(4), size)
}
pub fn has_hashes32(&self) -> bool {
!self.builder.get_pointer_field(4).is_null()
}
#[inline]
pub fn get_hashes64(self) -> ::capnp::Result<::capnp::primitive_list::Builder<'a,u64>> {
::capnp::traits::FromPointerBuilder::get_from_pointer(self.builder.get_pointer_field(5), ::core::option::Option::None)
}
#[inline]
pub fn set_hashes64(&mut self, value: ::capnp::primitive_list::Reader<'a,u64>) -> ::capnp::Result<()> {
::capnp::traits::SetPointerBuilder::set_pointer_builder(self.builder.get_pointer_field(5), value, false)
}
#[inline]
pub fn init_hashes64(self, size: u32) -> ::capnp::primitive_list::Builder<'a,u64> {
::capnp::traits::FromPointerBuilder::init_pointer(self.builder.get_pointer_field(5), size)
}
pub fn has_hashes64(&self) -> bool {
!self.builder.get_pointer_field(5).is_null()
}
#[inline]
pub fn get_length64(self) -> u64 {
self.builder.get_data_field::<u64>(1)
}
#[inline]
pub fn set_length64(&mut self, value: u64) {
self.builder.set_data_field::<u64>(1, value);
}
#[inline]
pub fn get_counts32(self) -> ::capnp::Result<::capnp::primitive_list::Builder<'a,u32>> {
::capnp::traits::FromPointerBuilder::get_from_pointer(self.builder.get_pointer_field(6), ::core::option::Option::None)
}
#[inline]
pub fn set_counts32(&mut self, value: ::capnp::primitive_list::Reader<'a,u32>) -> ::capnp::Result<()> {
::capnp::traits::SetPointerBuilder::set_pointer_builder(self.builder.get_pointer_field(6), value, false)
}
#[inline]
pub fn init_counts32(self, size: u32) -> ::capnp::primitive_list::Builder<'a,u32> {
::capnp::traits::FromPointerBuilder::init_pointer(self.builder.get_pointer_field(6), size)
}
pub fn has_counts32(&self) -> bool {
!self.builder.get_pointer_field(6).is_null()
}
#[inline]
pub fn get_num_valid_kmers(self) -> u64 {
self.builder.get_data_field::<u64>(2)
}
#[inline]
pub fn set_num_valid_kmers(&mut self, value: u64) {
self.builder.set_data_field::<u64>(2, value);
}
}
pub struct Pipeline { _typeless: ::capnp::any_pointer::Pipeline }
impl ::capnp::capability::FromTypelessPipeline for Pipeline {
fn new(typeless: ::capnp::any_pointer::Pipeline) -> Pipeline {
Pipeline { _typeless: typeless, }
}
}
impl Pipeline {
}
mod _private {
use capnp::private::layout;
pub const STRUCT_SIZE: layout::StructSize = layout::StructSize { data: 3, pointers: 7 };
pub const TYPE_ID: u64 = 0x96c3_ea4c_bfe1_43bf;
}
}
}
pub mod locus_list {
#[derive(Copy, Clone)]
pub struct Owned(());
impl <'a> ::capnp::traits::Owned<'a> for Owned { type Reader = Reader<'a>; type Builder = Builder<'a>; }
impl <'a> ::capnp::traits::OwnedStruct<'a> for Owned { type Reader = Reader<'a>; type Builder = Builder<'a>; }
impl ::capnp::traits::Pipelined for Owned { type Pipeline = Pipeline; }
#[derive(Clone, Copy)]
pub struct Reader<'a> { reader: ::capnp::private::layout::StructReader<'a> }
impl <'a,> ::capnp::traits::HasTypeId for Reader<'a,> {
#[inline]
fn type_id() -> u64 { _private::TYPE_ID }
}
impl <'a,> ::capnp::traits::FromStructReader<'a> for Reader<'a,> {
fn new(reader: ::capnp::private::layout::StructReader<'a>) -> Reader<'a,> {
Reader { reader, }
}
}
impl <'a,> ::capnp::traits::FromPointerReader<'a> for Reader<'a,> {
fn get_from_pointer(reader: &::capnp::private::layout::PointerReader<'a>, default: ::core::option::Option<&'a [capnp::Word]>) -> ::capnp::Result<Reader<'a,>> {
::core::result::Result::Ok(::capnp::traits::FromStructReader::new(reader.get_struct(default)?))
}
}
impl <'a,> ::capnp::traits::IntoInternalStructReader<'a> for Reader<'a,> {
fn into_internal_struct_reader(self) -> ::capnp::private::layout::StructReader<'a> {
self.reader
}
}
impl <'a,> ::capnp::traits::Imbue<'a> for Reader<'a,> {
fn imbue(&mut self, cap_table: &'a ::capnp::private::layout::CapTable) {
self.reader.imbue(::capnp::private::layout::CapTableReader::Plain(cap_table))
}
}
impl <'a,> Reader<'a,> {
pub fn reborrow(&self) -> Reader<'_,> {
Reader { .. *self }
}
pub fn total_size(&self) -> ::capnp::Result<::capnp::MessageSize> {
self.reader.total_size()
}
#[inline]
pub fn get_loci(self) -> ::capnp::Result<::capnp::struct_list::Reader<'a,crate::serialization::mash_capnp::min_hash::locus_list::locus::Owned>> {
::capnp::traits::FromPointerReader::get_from_pointer(&self.reader.get_pointer_field(0), ::core::option::Option::None)
}
pub fn has_loci(&self) -> bool {
!self.reader.get_pointer_field(0).is_null()
}
}
pub struct Builder<'a> { builder: ::capnp::private::layout::StructBuilder<'a> }
impl <'a,> ::capnp::traits::HasStructSize for Builder<'a,> {
#[inline]
fn struct_size() -> ::capnp::private::layout::StructSize { _private::STRUCT_SIZE }
}
impl <'a,> ::capnp::traits::HasTypeId for Builder<'a,> {
#[inline]
fn type_id() -> u64 { _private::TYPE_ID }
}
impl <'a,> ::capnp::traits::FromStructBuilder<'a> for Builder<'a,> {
fn new(builder: ::capnp::private::layout::StructBuilder<'a>) -> Builder<'a, > {
Builder { builder, }
}
}
impl <'a,> ::capnp::traits::ImbueMut<'a> for Builder<'a,> {
fn imbue_mut(&mut self, cap_table: &'a mut ::capnp::private::layout::CapTable) {
self.builder.imbue(::capnp::private::layout::CapTableBuilder::Plain(cap_table))
}
}
impl <'a,> ::capnp::traits::FromPointerBuilder<'a> for Builder<'a,> {
fn init_pointer(builder: ::capnp::private::layout::PointerBuilder<'a>, _size: u32) -> Builder<'a,> {
::capnp::traits::FromStructBuilder::new(builder.init_struct(_private::STRUCT_SIZE))
}
fn get_from_pointer(builder: ::capnp::private::layout::PointerBuilder<'a>, default: ::core::option::Option<&'a [capnp::Word]>) -> ::capnp::Result<Builder<'a,>> {
::core::result::Result::Ok(::capnp::traits::FromStructBuilder::new(builder.get_struct(_private::STRUCT_SIZE, default)?))
}
}
impl <'a,> ::capnp::traits::SetPointerBuilder for Reader<'a,> {
fn set_pointer_builder<'b>(pointer: ::capnp::private::layout::PointerBuilder<'b>, value: Reader<'a,>, canonicalize: bool) -> ::capnp::Result<()> { pointer.set_struct(&value.reader, canonicalize) }
}
impl <'a,> Builder<'a,> {
pub fn into_reader(self) -> Reader<'a,> {
::capnp::traits::FromStructReader::new(self.builder.into_reader())
}
pub fn reborrow(&mut self) -> Builder<'_,> {
Builder { .. *self }
}
pub fn reborrow_as_reader(&self) -> Reader<'_,> {
::capnp::traits::FromStructReader::new(self.builder.into_reader())
}
pub fn total_size(&self) -> ::capnp::Result<::capnp::MessageSize> {
self.builder.into_reader().total_size()
}
#[inline]
pub fn get_loci(self) -> ::capnp::Result<::capnp::struct_list::Builder<'a,crate::serialization::mash_capnp::min_hash::locus_list::locus::Owned>> {
::capnp::traits::FromPointerBuilder::get_from_pointer(self.builder.get_pointer_field(0), ::core::option::Option::None)
}
#[inline]
pub fn set_loci(&mut self, value: ::capnp::struct_list::Reader<'a,crate::serialization::mash_capnp::min_hash::locus_list::locus::Owned>) -> ::capnp::Result<()> {
::capnp::traits::SetPointerBuilder::set_pointer_builder(self.builder.get_pointer_field(0), value, false)
}
#[inline]
pub fn init_loci(self, size: u32) -> ::capnp::struct_list::Builder<'a,crate::serialization::mash_capnp::min_hash::locus_list::locus::Owned> {
::capnp::traits::FromPointerBuilder::init_pointer(self.builder.get_pointer_field(0), size)
}
pub fn has_loci(&self) -> bool {
!self.builder.get_pointer_field(0).is_null()
}
}
pub struct Pipeline { _typeless: ::capnp::any_pointer::Pipeline }
impl ::capnp::capability::FromTypelessPipeline for Pipeline {
fn new(typeless: ::capnp::any_pointer::Pipeline) -> Pipeline {
Pipeline { _typeless: typeless, }
}
}
impl Pipeline {
}
mod _private {
use capnp::private::layout;
pub const STRUCT_SIZE: layout::StructSize = layout::StructSize { data: 0, pointers: 1 };
pub const TYPE_ID: u64 = 0xe1dd_f186_e2b3_59dd;
}
pub mod locus {
#[derive(Copy, Clone)]
pub struct Owned(());
impl <'a> ::capnp::traits::Owned<'a> for Owned { type Reader = Reader<'a>; type Builder = Builder<'a>; }
impl <'a> ::capnp::traits::OwnedStruct<'a> for Owned { type Reader = Reader<'a>; type Builder = Builder<'a>; }
impl ::capnp::traits::Pipelined for Owned { type Pipeline = Pipeline; }
#[derive(Clone, Copy)]
pub struct Reader<'a> { reader: ::capnp::private::layout::StructReader<'a> }
impl <'a,> ::capnp::traits::HasTypeId for Reader<'a,> {
#[inline]
fn type_id() -> u64 { _private::TYPE_ID }
}
impl <'a,> ::capnp::traits::FromStructReader<'a> for Reader<'a,> {
fn new(reader: ::capnp::private::layout::StructReader<'a>) -> Reader<'a,> {
Reader { reader, }
}
}
impl <'a,> ::capnp::traits::FromPointerReader<'a> for Reader<'a,> {
fn get_from_pointer(reader: &::capnp::private::layout::PointerReader<'a>, default: ::core::option::Option<&'a [capnp::Word]>) -> ::capnp::Result<Reader<'a,>> {
::core::result::Result::Ok(::capnp::traits::FromStructReader::new(reader.get_struct(default)?))
}
}
impl <'a,> ::capnp::traits::IntoInternalStructReader<'a> for Reader<'a,> {
fn into_internal_struct_reader(self) -> ::capnp::private::layout::StructReader<'a> {
self.reader
}
}
impl <'a,> ::capnp::traits::Imbue<'a> for Reader<'a,> {
fn imbue(&mut self, cap_table: &'a ::capnp::private::layout::CapTable) {
self.reader.imbue(::capnp::private::layout::CapTableReader::Plain(cap_table))
}
}
impl <'a,> Reader<'a,> {
pub fn reborrow(&self) -> Reader<'_,> {
Reader { .. *self }
}
pub fn total_size(&self) -> ::capnp::Result<::capnp::MessageSize> {
self.reader.total_size()
}
#[inline]
pub fn get_sequence(self) -> u32 {
self.reader.get_data_field::<u32>(0)
}
#[inline]
pub fn get_position(self) -> u32 {
self.reader.get_data_field::<u32>(1)
}
#[inline]
pub fn get_hash32(self) -> u32 {
self.reader.get_data_field::<u32>(2)
}
#[inline]
pub fn get_hash64(self) -> u64 {
self.reader.get_data_field::<u64>(2)
}
}
pub struct Builder<'a> { builder: ::capnp::private::layout::StructBuilder<'a> }
impl <'a,> ::capnp::traits::HasStructSize for Builder<'a,> {
#[inline]
fn struct_size() -> ::capnp::private::layout::StructSize { _private::STRUCT_SIZE }
}
impl <'a,> ::capnp::traits::HasTypeId for Builder<'a,> {
#[inline]
fn type_id() -> u64 { _private::TYPE_ID }
}
impl <'a,> ::capnp::traits::FromStructBuilder<'a> for Builder<'a,> {
fn new(builder: ::capnp::private::layout::StructBuilder<'a>) -> Builder<'a, > {
Builder { builder, }
}
}
impl <'a,> ::capnp::traits::ImbueMut<'a> for Builder<'a,> {
fn imbue_mut(&mut self, cap_table: &'a mut ::capnp::private::layout::CapTable) {
self.builder.imbue(::capnp::private::layout::CapTableBuilder::Plain(cap_table))
}
}
impl <'a,> ::capnp::traits::FromPointerBuilder<'a> for Builder<'a,> {
fn init_pointer(builder: ::capnp::private::layout::PointerBuilder<'a>, _size: u32) -> Builder<'a,> {
::capnp::traits::FromStructBuilder::new(builder.init_struct(_private::STRUCT_SIZE))
}
fn get_from_pointer(builder: ::capnp::private::layout::PointerBuilder<'a>, default: ::core::option::Option<&'a [capnp::Word]>) -> ::capnp::Result<Builder<'a,>> {
::core::result::Result::Ok(::capnp::traits::FromStructBuilder::new(builder.get_struct(_private::STRUCT_SIZE, default)?))
}
}
impl <'a,> ::capnp::traits::SetPointerBuilder for Reader<'a,> {
fn set_pointer_builder<'b>(pointer: ::capnp::private::layout::PointerBuilder<'b>, value: Reader<'a,>, canonicalize: bool) -> ::capnp::Result<()> { pointer.set_struct(&value.reader, canonicalize) }
}
impl <'a,> Builder<'a,> {
pub fn into_reader(self) -> Reader<'a,> {
::capnp::traits::FromStructReader::new(self.builder.into_reader())
}
pub fn reborrow(&mut self) -> Builder<'_,> {
Builder { .. *self }
}
pub fn reborrow_as_reader(&self) -> Reader<'_,> {
::capnp::traits::FromStructReader::new(self.builder.into_reader())
}
pub fn total_size(&self) -> ::capnp::Result<::capnp::MessageSize> {
self.builder.into_reader().total_size()
}
#[inline]
pub fn get_sequence(self) -> u32 {
self.builder.get_data_field::<u32>(0)
}
#[inline]
pub fn set_sequence(&mut self, value: u32) {
self.builder.set_data_field::<u32>(0, value);
}
#[inline]
pub fn get_position(self) -> u32 {
self.builder.get_data_field::<u32>(1)
}
#[inline]
pub fn set_position(&mut self, value: u32) {
self.builder.set_data_field::<u32>(1, value);
}
#[inline]
pub fn get_hash32(self) -> u32 {
self.builder.get_data_field::<u32>(2)
}
#[inline]
pub fn set_hash32(&mut self, value: u32) {
self.builder.set_data_field::<u32>(2, value);
}
#[inline]
pub fn get_hash64(self) -> u64 {
self.builder.get_data_field::<u64>(2)
}
#[inline]
pub fn set_hash64(&mut self, value: u64) {
self.builder.set_data_field::<u64>(2, value);
}
}
pub struct Pipeline { _typeless: ::capnp::any_pointer::Pipeline }
impl ::capnp::capability::FromTypelessPipeline for Pipeline {
fn new(typeless: ::capnp::any_pointer::Pipeline) -> Pipeline {
Pipeline { _typeless: typeless, }
}
}
impl Pipeline {
}
mod _private {
use capnp::private::layout;
pub const STRUCT_SIZE: layout::StructSize = layout::StructSize { data: 3, pointers: 0 };
pub const TYPE_ID: u64 = 0xa648_d718_8f22_59f6;
}
}
}
}