data-beans 0.6.10

Sparse genomics data backends, QC, algorithms, and simulation
Documentation

Build #4573054 2026-09-24 00:18:21

# rustc version rustc 1.100.0-nightly (6bb1652a0 2026-09-22)

# docs.rs version docsrs 0.0.0 (9439cafc1e2ea4a64558a489c81351cd959d6077 2026-09-22 )

# build log [INFO] running `"docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "DOCS_RS=1" "-w" "/opt/rustwide/workdir" "--user" "1001:1001" "c79b44c8757ac851e8f658178195703431918f0b964efdb48b3b10a5b5c3d283" "/opt/rustwide/cargo-home/bin/cargo" "+nightly" "rustdoc" "--lib" "-Zrustdoc-map" "--config" "build.rustdocflags=[\"--cfg\", \"docsrs\", \"-Z\", \"unstable-options\", \"--emit=html-non-static-files\", \"--resource-suffix\", \"-20260922-1.100.0-nightly-6bb1652a0\", \"--static-root-path\", \"/-/rustdoc.static/\", \"--cap-lints\", \"warn\", \"--extern-html-root-takes-precedence\"]" "--offline" "-Zunstable-options" "--config=doc.extern-map.registries.crates-io=\"https://docs.rs/{pkg_name}/{version}/x86_64-unknown-linux-gnu\"" "-j12" "--target" "x86_64-unknown-linux-gnu" "-Zrustdoc-scrape-examples"` [INFO] [stderr] warning: `package.homepage` is redundant with `package.repository` [INFO] [stderr] --> Cargo.toml:142:12 [INFO] [stderr] | [INFO] [stderr] 142 | homepage = "https://github.com/causalpathlab/data-beans" [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] ... [INFO] [stderr] 146 | repository = "https://github.com/causalpathlab/data-beans" [INFO] [stderr] | --------------------------------------------- [INFO] [stderr] | [INFO] [stderr] = note: `cargo::redundant_homepage` is set to `warn` by default [INFO] [stderr] help: consider removing `package.homepage` [INFO] [stderr] warning: `data-beans` (manifest) generated 1 warning [INFO] [stderr] warning: target filter specified, but no targets matched; this is a no-op [INFO] [stderr] Documenting data-beans v0.6.10 (/opt/rustwide/workdir) [INFO] [stderr] warning: public documentation for `suggest_nnz_cutoff` links to private item `TROUGH_MAX_DEPTH` [INFO] [stderr] --> src/qc.rs:285:7 [INFO] [stderr] | [INFO] [stderr] 285 | /// [`TROUGH_MAX_DEPTH`] of the lower of the two peaks it separates, the [INFO] [stderr] | ^^^^^^^^^^^^^^^^ this item is private [INFO] [stderr] | [INFO] [stderr] = note: this link will resolve properly if you pass `--document-private-items` [INFO] [stderr] = note: `#[warn(rustdoc::private_intra_doc_links)]` on by default [INFO] [stderr] [INFO] [stderr] warning: public documentation for `suggest_nnz_cutoff` links to private item `TROUGH_MIN_PEAK_RATIO` [INFO] [stderr] --> src/qc.rs:286:26 [INFO] [stderr] | [INFO] [stderr] 286 | /// peaks are at least [`TROUGH_MIN_PEAK_RATIO`] apart, and each side holds [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^ this item is private [INFO] [stderr] | [INFO] [stderr] = note: this link will resolve properly if you pass `--document-private-items` [INFO] [stderr] [INFO] [stderr] warning: unresolved link to `mito_frac` [INFO] [stderr] --> src/qc_lib.rs:530:6 [INFO] [stderr] | [INFO] [stderr] 530 | /// [mito_frac], [ribo_frac], near_empty (0/1), train_keep (0/1). [INFO] [stderr] | ^^^^^^^^^ no item named `mito_frac` in scope [INFO] [stderr] | [INFO] [stderr] = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]` [INFO] [stderr] = note: `#[warn(rustdoc::broken_intra_doc_links)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unresolved link to `ribo_frac` [INFO] [stderr] --> src/qc_lib.rs:530:19 [INFO] [stderr] | [INFO] [stderr] 530 | /// [mito_frac], [ribo_frac], near_empty (0/1), train_keep (0/1). [INFO] [stderr] | ^^^^^^^^^ no item named `ribo_frac` in scope [INFO] [stderr] | [INFO] [stderr] = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]` [INFO] [stderr] [INFO] [stderr] warning: public documentation for `record_triplets_by_col` links to private item `SLAB_NNZ` [INFO] [stderr] --> src/sparse_io/traits.rs:776:11 [INFO] [stderr] | [INFO] [stderr] 776 | /// [`SLAB_NNZ`], and the backend's streaming audits check the column [INFO] [stderr] | ^^^^^^^^ this item is private [INFO] [stderr] | [INFO] [stderr] = note: this link will resolve properly if you pass `--document-private-items` [INFO] [stderr] [INFO] [stderr] warning: public documentation for `push` links to private item `SparseData` [INFO] [stderr] --> src/sparse_io_vector/push.rs:8:42 [INFO] [stderr] | [INFO] [stderr] 8 | /// * `data`: `Arc` to the backend [`SparseData`]. [INFO] [stderr] | ^^^^^^^^^^ this item is private [INFO] [stderr] | [INFO] [stderr] = note: this link will resolve properly if you pass `--document-private-items` [INFO] [stderr] [INFO] [stderr] warning: public documentation for `backend` links to private item `SparseIoVec::data_vec` [INFO] [stderr] --> src/sparse_io_vector/mod.rs:34:22 [INFO] [stderr] | [INFO] [stderr] 34 | /// Index into [`SparseIoVec::data_vec`]. [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^ this item is private [INFO] [stderr] | [INFO] [stderr] = note: this link will resolve properly if you pass `--document-private-items` [INFO] [stderr] [INFO] [stderr] warning: public documentation for `column_alignment` links to private item `Self::row_alignment` [INFO] [stderr] --> src/sparse_io_vector/mod.rs:360:50 [INFO] [stderr] | [INFO] [stderr] 360 | /// Current column-alignment mode. Mirrors [`Self::row_alignment`]. [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^ this item is private [INFO] [stderr] | [INFO] [stderr] = note: this link will resolve properly if you pass `--document-private-items` [INFO] [stderr] [INFO] [stderr] warning: public documentation for `clone_for_collapse` links to private item `DerivedCaches` [INFO] [stderr] --> src/sparse_io_vector/mod.rs:436:11 [INFO] [stderr] | [INFO] [stderr] 436 | /// [`DerivedCaches`], whose drop-on-clone behavior is what isolates the [INFO] [stderr] | ^^^^^^^^^^^^^ this item is private [INFO] [stderr] | [INFO] [stderr] = note: this link will resolve properly if you pass `--document-private-items` [INFO] [stderr] [INFO] [stderr] warning: public documentation for `clear_column_membership` links to private item `DerivedCaches` [INFO] [stderr] --> src/sparse_io_vector/mod.rs:602:55 [INFO] [stderr] | [INFO] [stderr] 602 | /// This is the fourth reset site alluded to in [`DerivedCaches`]. [INFO] [stderr] | ^^^^^^^^^^^^^ this item is private [INFO] [stderr] | [INFO] [stderr] = note: this link will resolve properly if you pass `--document-private-items` [INFO] [stderr] [INFO] [stderr] warning: public documentation for `GeneIndex` links to private item `alias_candidates` [INFO] [stderr] --> src/utilities/name_matching.rs:282:30 [INFO] [stderr] | [INFO] [stderr] 282 | /// 5. HGNC alias retry ([`alias_candidates`]: `HIST1H4C` ↔ `H4C3`, `MARCH2` ↔ `MARCHF2`), [INFO] [stderr] | ^^^^^^^^^^^^^^^^ this item is private [INFO] [stderr] | [INFO] [stderr] = note: this link will resolve properly if you pass `--document-private-items` [INFO] [stderr] [INFO] [stderr] warning: unresolved link to `auto_detect` [INFO] [stderr] --> src/aux/feature_names.rs:58:46 [INFO] [stderr] | [INFO] [stderr] 58 | /// through. Picked automatically when [`auto_detect`] finds both [INFO] [stderr] | ^^^^^^^^^^^ no item named `auto_detect` in scope [INFO] [stderr] | [INFO] [stderr] = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]` [INFO] [stderr] [INFO] [stderr] warning: unresolved link to `Mixed` [INFO] [stderr] --> src/aux/feature_names.rs:65:53 [INFO] [stderr] | [INFO] [stderr] 65 | /// [`Locus { merge_overlapping: true }`] and [`Mixed`] only describe [INFO] [stderr] | ^^^^^ no item named `Mixed` in scope [INFO] [stderr] | [INFO] [stderr] = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]` [INFO] [stderr] [INFO] [stderr] warning: unresolved link to `build_canonicalizer` [INFO] [stderr] --> src/aux/feature_names.rs:69:11 [INFO] [stderr] | [INFO] [stderr] 69 | /// [`build_canonicalizer`]. [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^ no item named `build_canonicalizer` in scope [INFO] [stderr] | [INFO] [stderr] = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]` [INFO] [stderr] help: there's a similarly named item `gene_canonicalize` [INFO] [stderr] | [INFO] [stderr] 69 - /// [`build_canonicalizer`]. [INFO] [stderr] 69 + /// [`gene_canonicalize`]. [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: unresolved link to `Exact` [INFO] [stderr] --> src/aux/feature_names.rs:87:33 [INFO] [stderr] | [INFO] [stderr] 87 | /// True iff this kind is [`Exact`] — no canonicalizer needed. [INFO] [stderr] | ^^^^^ no item named `Exact` in scope [INFO] [stderr] | [INFO] [stderr] = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]` [INFO] [stderr] [INFO] [stderr] warning: unresolved link to `Mixed` [INFO] [stderr] --> src/aux/feature_names.rs:108:24 [INFO] [stderr] | [INFO] [stderr] 108 | /// both ≥ 10% → [`Mixed`]; else loci ≥ 50% → [INFO] [stderr] | ^^^^^ no item named `Mixed` in scope [INFO] [stderr] | [INFO] [stderr] = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]` [INFO] [stderr] [INFO] [stderr] warning: unresolved link to `Exact` [INFO] [stderr] --> src/aux/feature_names.rs:110:39 [INFO] [stderr] | [INFO] [stderr] 110 | /// `Gene { delim: '_' }`; else [`Exact`]. [INFO] [stderr] | ^^^^^ no item named `Exact` in scope [INFO] [stderr] | [INFO] [stderr] = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]` [INFO] [stderr] [INFO] [stderr] warning: unresolved link to `SparseIoVec::with_row_canonicalizer` [INFO] [stderr] --> src/aux/feature_names.rs:172:11 [INFO] [stderr] | [INFO] [stderr] 172 | /// [`SparseIoVec::with_row_canonicalizer`]. Returns `None` for [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ no item named `SparseIoVec` in scope [INFO] [stderr] [INFO] [stderr] warning: unresolved link to `FeatureNameKind::LocusOverlap` [INFO] [stderr] --> src/aux/feature_names.rs:285:42 [INFO] [stderr] | [INFO] [stderr] 285 | /// Build a `RowNameCanonicalizer` for [`FeatureNameKind::LocusOverlap`]. [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ the enum `FeatureNameKind` has no variant or associated item named `LocusOverlap` [INFO] [stderr] [INFO] [stderr] warning: public documentation for `parse_feature_row` links to private item `MODALITIES` [INFO] [stderr] --> src/aux/feature_rows.rs:180:7 [INFO] [stderr] | [INFO] [stderr] 180 | /// [`MODALITIES`], and whatever precedes it is the unit however many slashes it [INFO] [stderr] | ^^^^^^^^^^ this item is private [INFO] [stderr] | [INFO] [stderr] = note: this link will resolve properly if you pass `--document-private-items` [INFO] [stderr] [INFO] [stderr] warning: `data-beans` (lib doc) generated 20 warnings [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 0.84s [INFO] [stderr] Generated /opt/rustwide/target/x86_64-unknown-linux-gnu/doc/data_beans/index.html [INFO] running `"docker" "inspect" "c79b44c8757ac851e8f658178195703431918f0b964efdb48b3b10a5b5c3d283"`