pub struct Atom<T: ModelInfo> { /* private fields */ }
Expand description

Struct that defines an atom.

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impl<T> Atom<T>where T: ModelInfo,

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pub fn new( element_symbol: String, atomic_number: u8, xyz: Point3<f64>, atom_id: u32 ) -> Self

Creates a new Atom.

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pub fn element_symbol(&self) -> &str

Returns a reference to the element symbol of this Atom<Format>.

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pub fn set_element_symbol(&mut self, element_symbol: String)

Sets the element symbol of this Atom<Format>.

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pub fn element_id(&self) -> u8

Returns the element id of this Atom<Format>.

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pub fn set_element_id(&mut self, atomic_number: u8)

Sets the element id of this Atom<Format>.

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pub fn xyz(&self) -> &Point3<f64>

Returns a reference to the xyz of this Atom<Format>.

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pub fn set_xyz(&mut self, xyz: Point3<f64>)

Sets the xyz of this Atom<Format>.

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pub fn atom_id(&self) -> u32

Returns the atom id of this Atom<Format>.

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pub fn set_atom_id(&mut self, atom_id: u32)

Sets the atom id of this Atom<Format>.

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pub fn fractional_xyz(&self) -> Option<&Point3<f64>>

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pub fn set_fractional_xyz(&mut self, fractional_xyz: Option<Point3<f64>>)

Trait Implementations§

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impl<T: Clone + ModelInfo> Clone for Atom<T>

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fn clone(&self) -> Atom<T>

Returns a copy of the value. Read more
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fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source. Read more
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impl<T: Debug + ModelInfo> Debug for Atom<T>

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fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter. Read more
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impl Display for Atom<MsiModel>

Display trait for Atom<MsiModel>

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fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter. Read more
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impl<'a, T: ModelInfo> From<AtomView<'a, T>> for Atom<T>

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fn from(src: AtomView<'a, T>) -> Self

Converts to this type from the input type.
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impl<T> Ord for Atom<T>where T: ModelInfo,

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fn cmp(&self, other: &Self) -> Ordering

This method returns an Ordering between self and other. Read more
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fn max(self, other: Self) -> Selfwhere Self: Sized,

Compares and returns the maximum of two values. Read more
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fn min(self, other: Self) -> Selfwhere Self: Sized,

Compares and returns the minimum of two values. Read more
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fn clamp(self, min: Self, max: Self) -> Selfwhere Self: Sized + PartialOrd<Self>,

Restrict a value to a certain interval. Read more
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impl<T> PartialEq<Atom<T>> for Atom<T>where T: ModelInfo,

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fn eq(&self, other: &Self) -> bool

This method tests for self and other values to be equal, and is used by ==.
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fn ne(&self, other: &Rhs) -> bool

This method tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.
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impl<T> PartialOrd<Atom<T>> for Atom<T>where T: ModelInfo,

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fn partial_cmp(&self, other: &Self) -> Option<Ordering>

This method returns an ordering between self and other values if one exists. Read more
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fn lt(&self, other: &Rhs) -> bool

This method tests less than (for self and other) and is used by the < operator. Read more
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fn le(&self, other: &Rhs) -> bool

This method tests less than or equal to (for self and other) and is used by the <= operator. Read more
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fn gt(&self, other: &Rhs) -> bool

This method tests greater than (for self and other) and is used by the > operator. Read more
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fn ge(&self, other: &Rhs) -> bool

This method tests greater than or equal to (for self and other) and is used by the >= operator. Read more
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impl<T> Transformation for Atom<T>where T: ModelInfo,

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fn rotate(&mut self, rotate_quatd: &UnitQuaternion<f64>)

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fn translate(&mut self, translate_matrix: &Translation<f64, 3>)

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impl<T> Eq for Atom<T>where T: ModelInfo,

Auto Trait Implementations§

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impl<T> RefUnwindSafe for Atom<T>where T: RefUnwindSafe,

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impl<T> Send for Atom<T>where T: Send,

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impl<T> Sync for Atom<T>where T: Sync,

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impl<T> Unpin for Atom<T>where T: Unpin,

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impl<T> UnwindSafe for Atom<T>where T: UnwindSafe,

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impl<T> Any for Twhere T: 'static + ?Sized,

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fn type_id(&self) -> TypeId

Gets the TypeId of self. Read more
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impl<T> Borrow<T> for Twhere T: ?Sized,

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fn borrow(&self) -> &T

Immutably borrows from an owned value. Read more
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impl<T> BorrowMut<T> for Twhere T: ?Sized,

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fn borrow_mut(&mut self) -> &mut T

Mutably borrows from an owned value. Read more
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impl<T> From<T> for T

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fn from(t: T) -> T

Returns the argument unchanged.

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impl<T, U> Into<U> for Twhere U: From<T>,

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fn into(self) -> U

Calls U::from(self).

That is, this conversion is whatever the implementation of From<T> for U chooses to do.

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impl<T> Pointable for T

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const ALIGN: usize = mem::align_of::<T>()

The alignment of pointer.
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type Init = T

The type for initializers.
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unsafe fn init(init: <T as Pointable>::Init) -> usize

Initializes a with the given initializer. Read more
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unsafe fn deref<'a>(ptr: usize) -> &'a T

Dereferences the given pointer. Read more
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unsafe fn deref_mut<'a>(ptr: usize) -> &'a mut T

Mutably dereferences the given pointer. Read more
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unsafe fn drop(ptr: usize)

Drops the object pointed to by the given pointer. Read more
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impl<T> Same<T> for T

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type Output = T

Should always be Self
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impl<SS, SP> SupersetOf<SS> for SPwhere SS: SubsetOf<SP>,

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fn to_subset(&self) -> Option<SS>

The inverse inclusion map: attempts to construct self from the equivalent element of its superset. Read more
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fn is_in_subset(&self) -> bool

Checks if self is actually part of its subset T (and can be converted to it).
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fn to_subset_unchecked(&self) -> SS

Use with care! Same as self.to_subset but without any property checks. Always succeeds.
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fn from_subset(element: &SS) -> SP

The inclusion map: converts self to the equivalent element of its superset.
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impl<T> ToOwned for Twhere T: Clone,

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type Owned = T

The resulting type after obtaining ownership.
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fn to_owned(&self) -> T

Creates owned data from borrowed data, usually by cloning. Read more
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fn clone_into(&self, target: &mut T)

Uses borrowed data to replace owned data, usually by cloning. Read more
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impl<T> ToString for Twhere T: Display + ?Sized,

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default fn to_string(&self) -> String

Converts the given value to a String. Read more
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impl<T, U> TryFrom<U> for Twhere U: Into<T>,

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type Error = Infallible

The type returned in the event of a conversion error.
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fn try_from(value: U) -> Result<T, <T as TryFrom<U>>::Error>

Performs the conversion.
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impl<T, U> TryInto<U> for Twhere U: TryFrom<T>,

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type Error = <U as TryFrom<T>>::Error

The type returned in the event of a conversion error.
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fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>

Performs the conversion.
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impl<V, T> VZip<V> for Twhere V: MultiLane<T>,

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fn vzip(self) -> V

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impl<T> Scalar for Twhere T: 'static + Clone + PartialEq<T> + Debug,