Bioutils

Simple Biological Utilities with Rust's [u8]

//! Examples for using checks:

//! use bioutils::charsets::; //! use bioutils::utils::; //! use bioutils::utils::check::CheckU8; //! //! let dna = b"ACTG"; //! let rna = b"ACUG"; //! let homopolymerN = b"NNNN"; //! let homopolymerA = b"AAAA"; //! let gapna = b"AC-G"; //! let nna = b"ACnG"; //! let quality = b"@ABC"; //! //! assert!(homopolymerN.is_homopolymer()); //! assert!(homopolymerA.is_homopolymer_not_n()); //! assert!(homopolymerN.is_homopolymer_n()); //! //! assert!(gapna.has_gap()); //! assert!(nna.has_n()); //! assert!(dna.is_iupac()); //! assert!(rna.is_basic_rna()); //! //! assert!(quality.is_phred33()); //! assert!(quality.is_phred64()); //! assert!(quality.is_solexa());