Enum bio::alignment::AlignmentMode
source ·
[−]pub enum AlignmentMode {
Local,
Semiglobal,
Global,
Custom,
}
Expand description
The modes of alignment supported by the aligner include standard modes such as Global, Semi-Global and Local alignment. In addition to this, user can also invoke the custom mode. In the custom mode, users can explicitly specify the clipping penalties for prefix and suffix of strings ‘x’ and ‘y’ independently. Under the hood the standard modes are implemented as special cases of the custom mode with the clipping penalties appropriately set.
The default alignment mode is Global.
Variants
Local
Semiglobal
Global
Custom
Trait Implementations
Returns the “default value” for a type. Read more
Auto Trait Implementations
impl RefUnwindSafe for AlignmentMode
impl Send for AlignmentMode
impl Sync for AlignmentMode
impl Unpin for AlignmentMode
impl UnwindSafe for AlignmentMode
Blanket Implementations
Mutably borrows from an owned value. Read more
Compare self to key
and return true
if they are equal.
The inverse inclusion map: attempts to construct self
from the equivalent element of its
superset. Read more
pub fn is_in_subset(&self) -> bool
pub fn is_in_subset(&self) -> bool
Checks if self
is actually part of its subset T
(and can be converted to it).
pub fn to_subset_unchecked(&self) -> SS
pub fn to_subset_unchecked(&self) -> SS
Use with care! Same as self.to_subset
but without any property checks. Always succeeds.
pub fn from_subset(element: &SS) -> SP
pub fn from_subset(element: &SS) -> SP
The inclusion map: converts self
to the equivalent element of its superset.