[−][src]Struct bio::alignment::pairwise::TracebackCell
Packed representation of one cell of a Smith-Waterman traceback matrix. Stores the I, D and S traceback matrix values in two bytes. Possible traceback moves include : start, insert, delete, match, substitute, prefix clip and suffix clip for x & y. So we need 4 bits each for matrices I, D, S to keep track of these 9 moves.
Methods
impl TracebackCell
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pub fn new() -> TracebackCell
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Initialize a blank traceback cell
pub fn set_i_bits(&mut self, value: u16)
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pub fn set_d_bits(&mut self, value: u16)
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pub fn set_s_bits(&mut self, value: u16)
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pub fn get_i_bits(self) -> u16
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pub fn get_d_bits(self) -> u16
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pub fn get_s_bits(self) -> u16
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pub fn set_all(&mut self, value: u16)
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Set all matrices to the same value.
Trait Implementations
impl Clone for TracebackCell
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fn clone(&self) -> TracebackCell
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fn clone_from(&mut self, source: &Self)
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Performs copy-assignment from source
. Read more
impl Copy for TracebackCell
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impl Default for TracebackCell
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Auto Trait Implementations
impl Sync for TracebackCell
impl Unpin for TracebackCell
impl Send for TracebackCell
impl UnwindSafe for TracebackCell
impl RefUnwindSafe for TracebackCell
Blanket Implementations
impl<T> From<T> for T
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impl<T, U> Into<U> for T where
U: From<T>,
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U: From<T>,
impl<T> ToOwned for T where
T: Clone,
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T: Clone,
type Owned = T
The resulting type after obtaining ownership.
fn to_owned(&self) -> T
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fn clone_into(&self, target: &mut T)
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impl<T, U> TryFrom<U> for T where
U: Into<T>,
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U: Into<T>,
type Error = Infallible
The type returned in the event of a conversion error.
fn try_from(value: U) -> Result<T, <T as TryFrom<U>>::Error>
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impl<T, U> TryInto<U> for T where
U: TryFrom<T>,
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U: TryFrom<T>,
type Error = <U as TryFrom<T>>::Error
The type returned in the event of a conversion error.
fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>
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impl<T> Borrow<T> for T where
T: ?Sized,
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T: ?Sized,
impl<T> BorrowMut<T> for T where
T: ?Sized,
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T: ?Sized,
fn borrow_mut(&mut self) -> &mut T
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impl<T> Any for T where
T: 'static + ?Sized,
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T: 'static + ?Sized,