Enum coverm::coverage_printer::CoveragePrinter

pub enum CoveragePrinter {
    StreamedCoveragePrinter,
    SparseCachedCoveragePrinter,
    DenseCachedCoveragePrinter {
        entry_type: Option<String>,
        estimator_headers: Option<Vec<String>>,
    },
    MetabatAdjustedCoveragePrinter,
}

Variants

StreamedCoveragePrinterSparseCachedCoveragePrinterDenseCachedCoveragePrinter

Fields of DenseCachedCoveragePrinter

entry_type: Option<String>estimator_headers: Option<Vec<String>>

MetabatAdjustedCoveragePrinter

Methods

impl CoveragePrinter

pub fn finalise_printing<'a>(
    &mut self,
    cached_coverage_taker: &'a CoverageTakerType<'a>,
    print_stream: &mut dyn Write,
    reads_mapped_per_sample: Option<&Vec<ReadsMapped>>,
    columns_to_normalise: &Vec<usize>
)

pub fn print_headers(
    &mut self,
    entry_type_str: &str,
    estimator_headers_vec: Vec<String>,
    print_stream: &mut dyn Write
)