List of all items

Structs

• cli::args::Args
• cli::config::Config
• cli::validation::ValidationResult
• core::alignment::AlignmentConfig
• core::alignment::DetailedAlignment
• core::distance::CacheKey
• core::distance::CacheMetadata
• core::distance::CacheValue
• core::distance::DistanceEngine
• core::distance::ModernCache
• data::profile::AllelicMatrix
• data::profile::AllelicProfile
• data::profile::DiversityMetrics
• data::sequence::SequenceDatabase
• data::sequence::SequenceInfo
• hashers::crc32::Crc32Hasher
• hashers::hamming::HammingHasher
• hashers::md5::Md5Hasher
• hashers::registry::HasherRegistry
• hashers::sequence::SequenceHasher
• hashers::sha256::Sha256Hasher
• hashers::traits::AlleleHashPair

Enums

• core::alignment::DistanceMode
• hashers::traits::AlleleHash

Traits

• hashers::traits::AlleleHasher

Functions

• cli::validation::validate_args
• core::alignment::compute_alignment_stats
• core::alignment::compute_hamming_distance
• core::distance::calculate_distance_matrix
• core::distance::calculate_sample_distance
• get_info
• output::write_csv
• output::write_matrix
• output::write_nexus
• output::write_phylip
• output::write_tsv

Constants

• VERSION