Struct census_proteomics::Peptide

pub struct Peptide<'s> {
    pub sequence: &'s str,
    pub values: Vec<u32>,
    pub unique: bool,
}

Peptide-level TMT quantification data

Fields

sequence: &'s str

Peptide sequence

values: Vec<u32>

Raw isobaric ion intensity values

unique: bool

Is this a unique peptide?

Methods

impl<'s> Peptide<'s>

pub fn tryptic(&self) -> bool

Return a boolean indicating whether the peptide has 2 tryptic sites

pub fn ratios(&self) -> Vec<f64>

Return a vector of normalized ratios, where the signal intensity for each channel is divided by the sum of all channels

pub fn swap_channels(&mut self, a: usize, b: usize)

Swap channels A and B, which are 0 indexed into the peptide values vector.

May panic

May panic if A or B exceed the length of the vector

Trait Implementations

impl<'s> Clone for Peptide<'s>

fn clone(&self) -> Peptide<'s>

Returns a copy of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl<'s> PartialOrd<Peptide<'s>> for Peptide<'s>

fn partial_cmp(&self, other: &Peptide<'s>) -> Option<Ordering>

This method returns an ordering between self and other values if one exists.

fn lt(&self, other: &Peptide<'s>) -> bool

This method tests less than (for self and other) and is used by the < operator.

fn le(&self, other: &Peptide<'s>) -> bool

This method tests less than or equal to (for self and other) and is used by the <= operator.

fn gt(&self, other: &Peptide<'s>) -> bool

This method tests greater than (for self and other) and is used by the > operator.

fn ge(&self, other: &Peptide<'s>) -> bool

This method tests greater than or equal to (for self and other) and is used by the >= operator.

impl<'s> PartialEq<Peptide<'s>> for Peptide<'s>

fn eq(&self, other: &Peptide<'s>) -> bool

This method tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Peptide<'s>) -> bool

This method tests for !=.

impl<'s> Debug for Peptide<'s>

fn fmt(&self, f: &mut Formatter) -> Result

Formats the value using the given formatter.