Enum census_proteomics::PeptideFilter

pub enum PeptideFilter<'a> {
    SequenceMatch(&'a str),
    SequenceExclude(&'a str),
    TotalIntensity(u32),
    ChannelCV(Vec<usize>, f64),
    ChannelIntensity(usize, u32),
    Tryptic,
    Unique,
}

Peptide-level filter

Filter individual peptides within a protein based on sequence mactches, total intensities, coefficient of variance between channels, or intensity values on specified channels.

Peptide can also be filtered based on whether they have 2 tryptic ends, or if they are unique.

Variants

SequenceMatch(&'a str)

Include only peptides that have a sequence matching the pattern

SequenceExclude(&'a str)

Include only peptides that do NOT have a sequence matching the pattern

TotalIntensity(u32)

Include only peptides that have a total ion itensity >= N

ChannelCV(Vec<usize>, f64)

ChannelCV(channels, N)

Include only peptides where the coeff. of variance is < N between the specified channels

ChannelIntensity(usize, u32)

ChannelIntensity(channel, cutoff)

Include only peptides that have an ion intensity >= N in the specified channel

Tryptic

Include only tryptic peptides

Unique

Include only unique peptides

Trait Implementations

impl<'a> Clone for PeptideFilter<'a>

fn clone(&self) -> PeptideFilter<'a>

Returns a copy of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl<'a> PartialOrd<PeptideFilter<'a>> for PeptideFilter<'a>

fn partial_cmp(&self, other: &PeptideFilter<'a>) -> Option<Ordering>

This method returns an ordering between self and other values if one exists.

fn lt(&self, other: &PeptideFilter<'a>) -> bool

This method tests less than (for self and other) and is used by the < operator.

fn le(&self, other: &PeptideFilter<'a>) -> bool

This method tests less than or equal to (for self and other) and is used by the <= operator.

fn gt(&self, other: &PeptideFilter<'a>) -> bool

This method tests greater than (for self and other) and is used by the > operator.

fn ge(&self, other: &PeptideFilter<'a>) -> bool

This method tests greater than or equal to (for self and other) and is used by the >= operator.

impl<'a> PartialEq<PeptideFilter<'a>> for PeptideFilter<'a>

fn eq(&self, other: &PeptideFilter<'a>) -> bool

This method tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &PeptideFilter<'a>) -> bool

This method tests for !=.

impl<'a> Debug for PeptideFilter<'a>

fn fmt(&self, f: &mut Formatter) -> Result

Formats the value using the given formatter.