Module block_aligner::simulate

Utility functions for simulating random sequences.

Statics

AMINO_ACIDS

All 20 amino acids.

NUC

All 4 nucleotides and the undetermined/placeholder nucleotide.

Functions

rand_mutate

Given an input byte string, craete a randomly mutated copy.

rand_mutate_insert

Given an input byte string, create a randomly mutated copy with a single long random insert.

rand_mutate_suffix

Given an input byte string, create a randomly mutated copy and add random suffixes to both strings.

rand_str

Generate a random string of a certain length, with a certain alphabet.