[−][src]Enum bio::alignment::AlignmentOperation
Alignment operations supported are match, substitution, insertion, deletion and clipping. Clipping is a special boundary condition where you are allowed to clip off the beginning/end of the sequence for a fixed clip penalty. The clip penalty could be different for the two sequences x and y, and the clipping operations on both are distinguishable (Xclip and Yclip). The usize value associated with the clipping operations are the lengths clipped. In case of standard modes like Global, Semi-Global and Local alignment, the clip operations are filtered out
Variants
Xclip(usize)
Yclip(usize)
Trait Implementations
impl StructuralEq for AlignmentOperation
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impl Eq for AlignmentOperation
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impl StructuralPartialEq for AlignmentOperation
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impl Clone for AlignmentOperation
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fn clone(&self) -> AlignmentOperation
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fn clone_from(&mut self, source: &Self)
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impl Serialize for AlignmentOperation
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fn serialize<__S>(
&self,
__serializer: __S
) -> Result<<__S as Serializer>::Ok, <__S as Serializer>::Error> where
__S: Serializer,
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&self,
__serializer: __S
) -> Result<<__S as Serializer>::Ok, <__S as Serializer>::Error> where
__S: Serializer,
impl<'de> Deserialize<'de> for AlignmentOperation
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fn deserialize<__D>(
__deserializer: __D
) -> Result<AlignmentOperation, <__D as Deserializer<'de>>::Error> where
__D: Deserializer<'de>,
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__deserializer: __D
) -> Result<AlignmentOperation, <__D as Deserializer<'de>>::Error> where
__D: Deserializer<'de>,
impl Copy for AlignmentOperation
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impl PartialEq<AlignmentOperation> for AlignmentOperation
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fn eq(&self, other: &AlignmentOperation) -> bool
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fn ne(&self, other: &AlignmentOperation) -> bool
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impl Debug for AlignmentOperation
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Auto Trait Implementations
impl Send for AlignmentOperation
impl Sync for AlignmentOperation
impl Unpin for AlignmentOperation
impl UnwindSafe for AlignmentOperation
impl RefUnwindSafe for AlignmentOperation
Blanket Implementations
impl<T, U> Into<U> for T where
U: From<T>,
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U: From<T>,
impl<T> From<T> for T
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impl<T> ToOwned for T where
T: Clone,
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T: Clone,
type Owned = T
The resulting type after obtaining ownership.
fn to_owned(&self) -> T
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fn clone_into(&self, target: &mut T)
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impl<T, U> TryFrom<U> for T where
U: Into<T>,
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U: Into<T>,
type Error = Infallible
The type returned in the event of a conversion error.
fn try_from(value: U) -> Result<T, <T as TryFrom<U>>::Error>
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impl<T, U> TryInto<U> for T where
U: TryFrom<T>,
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U: TryFrom<T>,
type Error = <U as TryFrom<T>>::Error
The type returned in the event of a conversion error.
fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>
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impl<T> Borrow<T> for T where
T: ?Sized,
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T: ?Sized,
impl<T> BorrowMut<T> for T where
T: ?Sized,
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T: ?Sized,
fn borrow_mut(&mut self) -> &mut T
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impl<T> Any for T where
T: 'static + ?Sized,
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T: 'static + ?Sized,
impl<Q, K> Equivalent<K> for Q where
K: Borrow<Q> + ?Sized,
Q: Eq + ?Sized,
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K: Borrow<Q> + ?Sized,
Q: Eq + ?Sized,
fn equivalent(&self, key: &K) -> bool
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impl<T> DeserializeOwned for T where
T: Deserialize<'de>,
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T: Deserialize<'de>,