Struct bio::pattern_matching::bom::BOM

pub struct BOM { /* fields omitted */ }

Backward oracle matching algorithm.

Methods

impl BOM

pub fn new<C, P>(pattern: P) -> Self where
    C: Borrow<u8> + Ord,
    P: IntoIterator<Item = C>,
    P::IntoIter: DoubleEndedIterator + ExactSizeIterator + Clone, 

Create a new instance for a given pattern.

Important traits for Matches<'a>

impl<'a> Iterator for Matches<'a> type Item = usize;

pub fn find_all<'a>(&'a self, text: TextSlice<'a>) -> Matches

Find all matches of the pattern in the given text. Matches are returned as an iterator over start positions.