Module beddata

Source
Expand description

The types here (BedParserStreamingIterator and BedParserParallelStreamingIterator) process incoming bed-like data and process into bigWig and bigBed files.

BedParserStreamingIterator processes the data serially, checking for out of order chromosomes. BedParserParallelStreamingIterator, on the other hand, is more complicated wrapper and will queue up to 4 extra chromosomes to be processed concurrently.

Structsยง

BedParserParallelStreamingIterator
BedParserStreamingIterator