[−][src]Struct bigtools::bigbedread::BigBedRead
Fields
info: BBIFileInfoMethods
impl BigBedRead<ReopenableFile, File>[src]
pub fn from_file_and_attach(path: String) -> Result<Self, BigBedReadAttachError>[src]
impl<R, S> BigBedRead<R, S> where
R: Reopen<S>,
S: SeekableRead, [src]
R: Reopen<S>,
S: SeekableRead,
pub fn from(reopen: R) -> Result<Self, BigBedReadAttachError>[src]
impl<R: 'static, S: 'static> BigBedRead<R, S> where
R: Reopen<S>,
S: SeekableRead, [src]
R: Reopen<S>,
S: SeekableRead,
pub fn get_interval<'a>(
&'a mut self,
chrom_name: &str,
start: u32,
end: u32
) -> Result<impl Iterator<Item = Result<BedEntry>> + Send + 'a>[src]
&'a mut self,
chrom_name: &str,
start: u32,
end: u32
) -> Result<impl Iterator<Item = Result<BedEntry>> + Send + 'a>
pub fn get_interval_move(
self,
chrom_name: &str,
start: u32,
end: u32
) -> Result<impl Iterator<Item = Result<BedEntry>> + Send>[src]
self,
chrom_name: &str,
start: u32,
end: u32
) -> Result<impl Iterator<Item = Result<BedEntry>> + Send>
pub fn get_zoom_interval<'a>(
&'a mut self,
chrom_name: &str,
start: u32,
end: u32,
reduction_level: u32
) -> Result<impl Iterator<Item = Result<ZoomRecord>> + Send + 'a>[src]
&'a mut self,
chrom_name: &str,
start: u32,
end: u32,
reduction_level: u32
) -> Result<impl Iterator<Item = Result<ZoomRecord>> + Send + 'a>
Trait Implementations
impl<R, S> BBIRead<S> for BigBedRead<R, S> where
R: Reopen<S>,
S: SeekableRead, [src]
R: Reopen<S>,
S: SeekableRead,
fn get_info(&self) -> &BBIFileInfo[src]
fn ensure_reader(
&mut self
) -> Result<&mut ByteOrdered<BufReader<S>, Endianness>>[src]
&mut self
) -> Result<&mut ByteOrdered<BufReader<S>, Endianness>>
fn close(&mut self)[src]
fn get_chroms(&self) -> Vec<ChromAndSize>[src]
fn search_cir_tree(
&mut self,
chrom_name: &str,
start: u32,
end: u32
) -> Result<Vec<Block>>[src]
&mut self,
chrom_name: &str,
start: u32,
end: u32
) -> Result<Vec<Block>>
fn get_overlapping_blocks(
&mut self,
chrom_name: &str,
start: u32,
end: u32
) -> Result<Vec<Block>>[src]
&mut self,
chrom_name: &str,
start: u32,
end: u32
) -> Result<Vec<Block>>
impl<R, S> Clone for BigBedRead<R, S> where
R: Reopen<S>,
S: SeekableRead, [src]
R: Reopen<S>,
S: SeekableRead,
fn clone(&self) -> Self[src]
fn clone_from(&mut self, source: &Self)1.0.0[src]
Auto Trait Implementations
impl<R, S> Send for BigBedRead<R, S>
impl<R, S> Sync for BigBedRead<R, S> where
R: Sync,
S: Sync,
R: Sync,
S: Sync,
impl<R, S> Unpin for BigBedRead<R, S> where
R: Unpin,
S: Unpin,
R: Unpin,
S: Unpin,
impl<R, S> UnwindSafe for BigBedRead<R, S> where
R: UnwindSafe,
S: UnwindSafe,
R: UnwindSafe,
S: UnwindSafe,
impl<R, S> RefUnwindSafe for BigBedRead<R, S> where
R: RefUnwindSafe,
S: RefUnwindSafe,
R: RefUnwindSafe,
S: RefUnwindSafe,
Blanket Implementations
impl<T, U> Into<U> for T where
U: From<T>, [src]
U: From<T>,
impl<T> From<T> for T[src]
impl<T> ToOwned for T where
T: Clone, [src]
T: Clone,
type Owned = T
The resulting type after obtaining ownership.
fn to_owned(&self) -> T[src]
fn clone_into(&self, target: &mut T)[src]
impl<T, U> TryFrom<U> for T where
U: Into<T>, [src]
U: Into<T>,
type Error = Infallible
The type returned in the event of a conversion error.
fn try_from(value: U) -> Result<T, <T as TryFrom<U>>::Error>[src]
impl<T, U> TryInto<U> for T where
U: TryFrom<T>, [src]
U: TryFrom<T>,
type Error = <U as TryFrom<T>>::Error
The type returned in the event of a conversion error.
fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>[src]
impl<T> Borrow<T> for T where
T: ?Sized, [src]
T: ?Sized,
impl<T> BorrowMut<T> for T where
T: ?Sized, [src]
T: ?Sized,
fn borrow_mut(&mut self) -> &mut T[src]
impl<T> Any for T where
T: 'static + ?Sized, [src]
T: 'static + ?Sized,
impl<T> Erased for T
impl<T, U> TryInto<U> for T where
U: TryFrom<T>,
U: TryFrom<T>,