bed_utils::bed

Module map

Source

Structsยง

GIntervalIndexMap
A Bed map that preserves the order.
GIntervalIndexSet
A Bed map that preserves the order.
GIntervalMap
A map from genomic internvals to values, internally represented as a interval tree for efficient queries. Note that GIntervalMap permits duplicated records.
GIntervalQueryIter
An GIntervalQueryIter is returned by Intervaltree::find and iterates over the entries overlapping the query
Iter