Struct aws_sdk_omics::client::Client

pub struct Client { /* private fields */ }

Client for Amazon Omics

Client for invoking operations on Amazon Omics. Each operation on Amazon Omics is a method on this this struct. .send() MUST be invoked on the generated operations to dispatch the request to the service.

Constructing a Client

A Config is required to construct a client. For most use cases, the aws-config crate should be used to automatically resolve this config using aws_config::load_from_env(), since this will resolve an SdkConfig which can be shared across multiple different AWS SDK clients. This config resolution process can be customized by calling aws_config::from_env() instead, which returns a ConfigLoader that uses the builder pattern to customize the default config.

In the simplest case, creating a client looks as follows:

let config = aws_config::load_from_env().await;
let client = aws_sdk_omics::Client::new(&config);

Occasionally, SDKs may have additional service-specific that can be set on the Config that is absent from SdkConfig, or slightly different settings for a specific client may be desired. The Config struct implements From<&SdkConfig>, so setting these specific settings can be done as follows:

let sdk_config = ::aws_config::load_from_env().await;
let config = aws_sdk_omics::config::Builder::from(&sdk_config)
    .some_service_specific_setting("value")
    .build();

See the aws-config docs and Config for more information on customizing configuration.

Note: Client construction is expensive due to connection thread pool initialization, and should be done once at application start-up.

Implementations

impl Client

pub fn abort_multipart_read_set_upload( &self ) -> AbortMultipartReadSetUploadFluentBuilder

Constructs a fluent builder for the AbortMultipartReadSetUpload operation.

• The fluent builder is configurable:
  • sequence_store_id(impl Into<String>) / set_sequence_store_id(Option<String>):

    The sequence store ID for the store involved in the multipart upload.

  • upload_id(impl Into<String>) / set_upload_id(Option<String>):

    The ID for the multipart upload.

• On success, responds with AbortMultipartReadSetUploadOutput
• On failure, responds with SdkError<AbortMultipartReadSetUploadError>

impl Client

pub fn batch_delete_read_set(&self) -> BatchDeleteReadSetFluentBuilder

Constructs a fluent builder for the BatchDeleteReadSet operation.

• The fluent builder is configurable:
  • ids(impl Into<String>) / set_ids(Option<Vec<String>>):

    The read sets’ IDs.

  • sequence_store_id(impl Into<String>) / set_sequence_store_id(Option<String>):

    The read sets’ sequence store ID.

• On success, responds with BatchDeleteReadSetOutput with field(s):
  • errors(Option<Vec<ReadSetBatchError>>):

    Errors returned by individual delete operations.

• On failure, responds with SdkError<BatchDeleteReadSetError>

impl Client

pub fn cancel_annotation_import_job( &self ) -> CancelAnnotationImportJobFluentBuilder

Constructs a fluent builder for the CancelAnnotationImportJob operation.

• The fluent builder is configurable:
  • job_id(impl Into<String>) / set_job_id(Option<String>):

    The job’s ID.

• On success, responds with CancelAnnotationImportJobOutput
• On failure, responds with SdkError<CancelAnnotationImportJobError>

impl Client

pub fn cancel_run(&self) -> CancelRunFluentBuilder

Constructs a fluent builder for the CancelRun operation.

• The fluent builder is configurable:
  • id(impl Into<String>) / set_id(Option<String>):

    The run’s ID.

• On success, responds with CancelRunOutput
• On failure, responds with SdkError<CancelRunError>

impl Client

pub fn cancel_variant_import_job(&self) -> CancelVariantImportJobFluentBuilder

Constructs a fluent builder for the CancelVariantImportJob operation.

• The fluent builder is configurable:
  • job_id(impl Into<String>) / set_job_id(Option<String>):

    The job’s ID.

• On success, responds with CancelVariantImportJobOutput
• On failure, responds with SdkError<CancelVariantImportJobError>

impl Client

pub fn complete_multipart_read_set_upload( &self ) -> CompleteMultipartReadSetUploadFluentBuilder

Constructs a fluent builder for the CompleteMultipartReadSetUpload operation.

• The fluent builder is configurable:
  • sequence_store_id(impl Into<String>) / set_sequence_store_id(Option<String>):

    The sequence store ID for the store involved in the multipart upload.

  • upload_id(impl Into<String>) / set_upload_id(Option<String>):

    The ID for the multipart upload.

  • parts(CompleteReadSetUploadPartListItem) / set_parts(Option<Vec<CompleteReadSetUploadPartListItem>>):

    The individual uploads or parts of a multipart upload.

• On success, responds with CompleteMultipartReadSetUploadOutput with field(s):
  • read_set_id(Option<String>):

    The read set ID created for an uploaded read set.

• On failure, responds with SdkError<CompleteMultipartReadSetUploadError>

impl Client

pub fn create_annotation_store(&self) -> CreateAnnotationStoreFluentBuilder

Constructs a fluent builder for the CreateAnnotationStore operation.

• The fluent builder is configurable:
  • reference(ReferenceItem) / set_reference(Option<ReferenceItem>):

    The genome reference for the store’s annotations.

  • name(impl Into<String>) / set_name(Option<String>):

    A name for the store.

  • description(impl Into<String>) / set_description(Option<String>):

    A description for the store.

  • tags(impl Into<String>, impl Into<String>) / set_tags(Option<HashMap<String, String>>):

    Tags for the store.

  • sse_config(SseConfig) / set_sse_config(Option<SseConfig>):

    Server-side encryption (SSE) settings for the store.

  • store_format(StoreFormat) / set_store_format(Option<StoreFormat>):

    The annotation file format of the store.

  • store_options(StoreOptions) / set_store_options(Option<StoreOptions>):

    File parsing options for the annotation store.

• On success, responds with CreateAnnotationStoreOutput with field(s):
  • id(Option<String>):

    The store’s ID.

  • reference(Option<ReferenceItem>):

    The store’s genome reference. Required for all stores except TSV format with generic annotations.

  • store_format(Option<StoreFormat>):

    The annotation file format of the store.

  • store_options(Option<StoreOptions>):

    The store’s file parsing options.

  • status(Option<StoreStatus>):

    The store’s status.

  • name(Option<String>):

    The store’s name.

  • creation_time(Option<DateTime>):

    When the store was created.

• On failure, responds with SdkError<CreateAnnotationStoreError>

impl Client

pub fn create_multipart_read_set_upload( &self ) -> CreateMultipartReadSetUploadFluentBuilder

Constructs a fluent builder for the CreateMultipartReadSetUpload operation.

• The fluent builder is configurable:
  • sequence_store_id(impl Into<String>) / set_sequence_store_id(Option<String>):

    The sequence store ID for the store that is the destination of the multipart uploads.

  • client_token(impl Into<String>) / set_client_token(Option<String>):

    An idempotency token that can be used to avoid triggering multiple multipart uploads.

  • source_file_type(FileType) / set_source_file_type(Option<FileType>):

    The type of file being uploaded.

  • subject_id(impl Into<String>) / set_subject_id(Option<String>):

    The source’s subject ID.

  • sample_id(impl Into<String>) / set_sample_id(Option<String>):

    The source’s sample ID.

  • generated_from(impl Into<String>) / set_generated_from(Option<String>):

    Where the source originated.

  • reference_arn(impl Into<String>) / set_reference_arn(Option<String>):

    The ARN of the reference.

  • name(impl Into<String>) / set_name(Option<String>):

    The name of the read set.

  • description(impl Into<String>) / set_description(Option<String>):

    The description of the read set.

  • tags(impl Into<String>, impl Into<String>) / set_tags(Option<HashMap<String, String>>):

    Any tags to add to the read set.

• On success, responds with CreateMultipartReadSetUploadOutput with field(s):
  • sequence_store_id(Option<String>):

    The sequence store ID for the store that the read set will be created in.

  • upload_id(Option<String>):

    he ID for the initiated multipart upload.

  • source_file_type(Option<FileType>):

    The file type of the read set source.

  • subject_id(Option<String>):

    The source’s subject ID.

  • sample_id(Option<String>):

    The source’s sample ID.

  • generated_from(Option<String>):

    The source of the read set.

  • reference_arn(Option<String>):

    The read set source’s reference ARN.

  • name(Option<String>):

    The name of the read set.

  • description(Option<String>):

    The description of the read set.

  • tags(Option<HashMap<String, String>>):

    The tags to add to the read set.

  • creation_time(Option<DateTime>):

    The creation time of the multipart upload.

• On failure, responds with SdkError<CreateMultipartReadSetUploadError>

impl Client

pub fn create_reference_store(&self) -> CreateReferenceStoreFluentBuilder

Constructs a fluent builder for the CreateReferenceStore operation.

• The fluent builder is configurable:
  • name(impl Into<String>) / set_name(Option<String>):

    A name for the store.

  • description(impl Into<String>) / set_description(Option<String>):

    A description for the store.

  • sse_config(SseConfig) / set_sse_config(Option<SseConfig>):

    Server-side encryption (SSE) settings for the store.

  • tags(impl Into<String>, impl Into<String>) / set_tags(Option<HashMap<String, String>>):

    Tags for the store.

  • client_token(impl Into<String>) / set_client_token(Option<String>):

    To ensure that requests don’t run multiple times, specify a unique token for each request.

• On success, responds with CreateReferenceStoreOutput with field(s):
  • id(Option<String>):

    The store’s ID.

  • arn(Option<String>):

    The store’s ARN.

  • name(Option<String>):

    The store’s name.

  • description(Option<String>):

    The store’s description.

  • sse_config(Option<SseConfig>):

    The store’s SSE settings.

  • creation_time(Option<DateTime>):

    When the store was created.

• On failure, responds with SdkError<CreateReferenceStoreError>

impl Client

pub fn create_run_group(&self) -> CreateRunGroupFluentBuilder

Constructs a fluent builder for the CreateRunGroup operation.

• The fluent builder is configurable:
  • name(impl Into<String>) / set_name(Option<String>):

    A name for the group.

  • max_cpus(i32) / set_max_cpus(Option<i32>):

    The maximum number of CPUs to use in the group.

  • max_runs(i32) / set_max_runs(Option<i32>):

    The maximum number of concurrent runs for the group.

  • max_duration(i32) / set_max_duration(Option<i32>):

    A maximum run time for the group in minutes.

  • tags(impl Into<String>, impl Into<String>) / set_tags(Option<HashMap<String, String>>):

    Tags for the group.

  • request_id(impl Into<String>) / set_request_id(Option<String>):

    To ensure that requests don’t run multiple times, specify a unique ID for each request.

  • max_gpus(i32) / set_max_gpus(Option<i32>):

    The maximum GPUs that can be used by a run group.

• On success, responds with CreateRunGroupOutput with field(s):
  • arn(Option<String>):

    The group’s ARN.

  • id(Option<String>):

    The group’s ID.

  • tags(Option<HashMap<String, String>>):

    Tags for the run group.

• On failure, responds with SdkError<CreateRunGroupError>

impl Client

pub fn create_sequence_store(&self) -> CreateSequenceStoreFluentBuilder

Constructs a fluent builder for the CreateSequenceStore operation.

• The fluent builder is configurable:
  • name(impl Into<String>) / set_name(Option<String>):

    A name for the store.

  • description(impl Into<String>) / set_description(Option<String>):

    A description for the store.

  • sse_config(SseConfig) / set_sse_config(Option<SseConfig>):

    Server-side encryption (SSE) settings for the store.

  • tags(impl Into<String>, impl Into<String>) / set_tags(Option<HashMap<String, String>>):

    Tags for the store.

  • client_token(impl Into<String>) / set_client_token(Option<String>):

    To ensure that requests don’t run multiple times, specify a unique token for each request.

  • fallback_location(impl Into<String>) / set_fallback_location(Option<String>):

    An S3 location that is used to store files that have failed a direct upload.

• On success, responds with CreateSequenceStoreOutput with field(s):
  • id(Option<String>):

    The store’s ID.

  • arn(Option<String>):

    The store’s ARN.

  • name(Option<String>):

    The store’s name.

  • description(Option<String>):

    The store’s description.

  • sse_config(Option<SseConfig>):

    The store’s SSE settings.

  • creation_time(Option<DateTime>):

    When the store was created.

  • fallback_location(Option<String>):

    An S3 location that is used to store files that have failed a direct upload.

• On failure, responds with SdkError<CreateSequenceStoreError>

impl Client

pub fn create_variant_store(&self) -> CreateVariantStoreFluentBuilder

Constructs a fluent builder for the CreateVariantStore operation.

• The fluent builder is configurable:
  • reference(ReferenceItem) / set_reference(Option<ReferenceItem>):

    The genome reference for the store’s variants.

  • name(impl Into<String>) / set_name(Option<String>):

    A name for the store.

  • description(impl Into<String>) / set_description(Option<String>):

    A description for the store.

  • tags(impl Into<String>, impl Into<String>) / set_tags(Option<HashMap<String, String>>):

    Tags for the store.

  • sse_config(SseConfig) / set_sse_config(Option<SseConfig>):

    Server-side encryption (SSE) settings for the store.

• On success, responds with CreateVariantStoreOutput with field(s):
  • id(Option<String>):

    The store’s ID.

  • reference(Option<ReferenceItem>):

    The store’s genome reference.

  • status(Option<StoreStatus>):

    The store’s status.

  • name(Option<String>):

    The store’s name.

  • creation_time(Option<DateTime>):

    When the store was created.

• On failure, responds with SdkError<CreateVariantStoreError>

impl Client

pub fn create_workflow(&self) -> CreateWorkflowFluentBuilder

Constructs a fluent builder for the CreateWorkflow operation.

• The fluent builder is configurable:
  • name(impl Into<String>) / set_name(Option<String>):

    A name for the workflow.

  • description(impl Into<String>) / set_description(Option<String>):

    A description for the workflow.

  • engine(WorkflowEngine) / set_engine(Option<WorkflowEngine>):

    An engine for the workflow.

  • definition_zip(Blob) / set_definition_zip(Option<Blob>):

    A ZIP archive for the workflow.

  • definition_uri(impl Into<String>) / set_definition_uri(Option<String>):

    The URI of a definition for the workflow.

  • main(impl Into<String>) / set_main(Option<String>):

    The path of the main definition file for the workflow.

  • parameter_template(impl Into<String>, WorkflowParameter) / set_parameter_template(Option<HashMap<String, WorkflowParameter>>):

    A parameter template for the workflow.

  • storage_capacity(i32) / set_storage_capacity(Option<i32>):

    A storage capacity for the workflow in gigabytes.

  • tags(impl Into<String>, impl Into<String>) / set_tags(Option<HashMap<String, String>>):

    Tags for the workflow.

  • request_id(impl Into<String>) / set_request_id(Option<String>):

    To ensure that requests don’t run multiple times, specify a unique ID for each request.

  • accelerators(Accelerators) / set_accelerators(Option<Accelerators>):

    The computational accelerator specified to run the workflow.

• On success, responds with CreateWorkflowOutput with field(s):
  • arn(Option<String>):

    The workflow’s ARN.

  • id(Option<String>):

    The workflow’s ID.

  • status(Option<WorkflowStatus>):

    The workflow’s status.

  • tags(Option<HashMap<String, String>>):

    The workflow’s tags.

• On failure, responds with SdkError<CreateWorkflowError>

impl Client

pub fn delete_annotation_store(&self) -> DeleteAnnotationStoreFluentBuilder

Constructs a fluent builder for the DeleteAnnotationStore operation.

• The fluent builder is configurable:
  • name(impl Into<String>) / set_name(Option<String>):

    The store’s name.

  • force(bool) / set_force(Option<bool>):

    Whether to force deletion.

• On success, responds with DeleteAnnotationStoreOutput with field(s):
  • status(Option<StoreStatus>):

    The store’s status.

• On failure, responds with SdkError<DeleteAnnotationStoreError>

impl Client

pub fn delete_reference(&self) -> DeleteReferenceFluentBuilder

Constructs a fluent builder for the DeleteReference operation.

• The fluent builder is configurable:
  • id(impl Into<String>) / set_id(Option<String>):

    The reference’s ID.

  • reference_store_id(impl Into<String>) / set_reference_store_id(Option<String>):

    The reference’s store ID.

• On success, responds with DeleteReferenceOutput
• On failure, responds with SdkError<DeleteReferenceError>

impl Client

pub fn delete_reference_store(&self) -> DeleteReferenceStoreFluentBuilder

Constructs a fluent builder for the DeleteReferenceStore operation.

• The fluent builder is configurable:
  • id(impl Into<String>) / set_id(Option<String>):

    The store’s ID.

• On success, responds with DeleteReferenceStoreOutput
• On failure, responds with SdkError<DeleteReferenceStoreError>

impl Client

pub fn delete_run(&self) -> DeleteRunFluentBuilder

Constructs a fluent builder for the DeleteRun operation.

• The fluent builder is configurable:
  • id(impl Into<String>) / set_id(Option<String>):

    The run’s ID.

• On success, responds with DeleteRunOutput
• On failure, responds with SdkError<DeleteRunError>

impl Client

pub fn delete_run_group(&self) -> DeleteRunGroupFluentBuilder

Constructs a fluent builder for the DeleteRunGroup operation.

• The fluent builder is configurable:
  • id(impl Into<String>) / set_id(Option<String>):

    The run group’s ID.

• On success, responds with DeleteRunGroupOutput
• On failure, responds with SdkError<DeleteRunGroupError>

impl Client

pub fn delete_sequence_store(&self) -> DeleteSequenceStoreFluentBuilder

Constructs a fluent builder for the DeleteSequenceStore operation.

• The fluent builder is configurable:
  • id(impl Into<String>) / set_id(Option<String>):

    The sequence store’s ID.

• On success, responds with DeleteSequenceStoreOutput
• On failure, responds with SdkError<DeleteSequenceStoreError>

impl Client

pub fn delete_variant_store(&self) -> DeleteVariantStoreFluentBuilder

Constructs a fluent builder for the DeleteVariantStore operation.

• The fluent builder is configurable:
  • name(impl Into<String>) / set_name(Option<String>):

    The store’s name.

  • force(bool) / set_force(Option<bool>):

    Whether to force deletion.

• On success, responds with DeleteVariantStoreOutput with field(s):
  • status(Option<StoreStatus>):

    The store’s status.

• On failure, responds with SdkError<DeleteVariantStoreError>

impl Client

pub fn delete_workflow(&self) -> DeleteWorkflowFluentBuilder

Constructs a fluent builder for the DeleteWorkflow operation.

• The fluent builder is configurable:
  • id(impl Into<String>) / set_id(Option<String>):

    The workflow’s ID.

• On success, responds with DeleteWorkflowOutput
• On failure, responds with SdkError<DeleteWorkflowError>

impl Client

pub fn get_annotation_import_job(&self) -> GetAnnotationImportJobFluentBuilder

Constructs a fluent builder for the GetAnnotationImportJob operation.

• The fluent builder is configurable:
  • job_id(impl Into<String>) / set_job_id(Option<String>):

    The job’s ID.

• On success, responds with GetAnnotationImportJobOutput with field(s):
  • id(Option<String>):

    The job’s ID.

  • destination_name(Option<String>):

    The job’s destination annotation store.

  • role_arn(Option<String>):

    The job’s service role ARN.

  • status(Option<JobStatus>):

    The job’s status.

  • status_message(Option<String>):

    The job’s status message.

  • creation_time(Option<DateTime>):

    When the job was created.

  • update_time(Option<DateTime>):

    When the job was updated.

  • completion_time(Option<DateTime>):

    When the job completed.

  • items(Option<Vec<AnnotationImportItemDetail>>):

    The job’s imported items.

  • run_left_normalization(bool):

    The job’s left normalization setting.

  • format_options(Option<FormatOptions>):

    Formatting options for a file.

  • annotation_fields(Option<HashMap<String, String>>):

    The annotation schema generated by the parsed annotation data.

• On failure, responds with SdkError<GetAnnotationImportJobError>

impl Client

pub fn get_annotation_store(&self) -> GetAnnotationStoreFluentBuilder

Constructs a fluent builder for the GetAnnotationStore operation.

• The fluent builder is configurable:
  • name(impl Into<String>) / set_name(Option<String>):

    The store’s name.

• On success, responds with GetAnnotationStoreOutput with field(s):
  • id(Option<String>):

    The store’s ID.

  • reference(Option<ReferenceItem>):

    The store’s genome reference.

  • status(Option<StoreStatus>):

    The store’s status.

  • store_arn(Option<String>):

    The store’s ARN.

  • name(Option<String>):

    The store’s name.

  • description(Option<String>):

    The store’s description.

  • sse_config(Option<SseConfig>):

    The store’s server-side encryption (SSE) settings.

  • creation_time(Option<DateTime>):

    When the store was created.

  • update_time(Option<DateTime>):

    When the store was updated.

  • tags(Option<HashMap<String, String>>):

    The store’s tags.

  • store_options(Option<StoreOptions>):

    The store’s parsing options.

  • store_format(Option<StoreFormat>):

    The store’s annotation file format.

  • status_message(Option<String>):

    A status message.

  • store_size_bytes(Option<i64>):

    The store’s size in bytes.

• On failure, responds with SdkError<GetAnnotationStoreError>

impl Client

pub fn get_read_set(&self) -> GetReadSetFluentBuilder

Constructs a fluent builder for the GetReadSet operation.

• The fluent builder is configurable:
  • id(impl Into<String>) / set_id(Option<String>):

    The read set’s ID.

  • sequence_store_id(impl Into<String>) / set_sequence_store_id(Option<String>):

    The read set’s sequence store ID.

  • file(ReadSetFile) / set_file(Option<ReadSetFile>):

    The file to retrieve.

  • part_number(i32) / set_part_number(Option<i32>):

    The part number to retrieve.

• On success, responds with GetReadSetOutput with field(s):
  • payload(ByteStream):

    The read set file payload.

• On failure, responds with SdkError<GetReadSetError>

impl Client

pub fn get_read_set_activation_job( &self ) -> GetReadSetActivationJobFluentBuilder

Constructs a fluent builder for the GetReadSetActivationJob operation.

• The fluent builder is configurable:
  • id(impl Into<String>) / set_id(Option<String>):

    The job’s ID.

  • sequence_store_id(impl Into<String>) / set_sequence_store_id(Option<String>):

    The job’s sequence store ID.

• On success, responds with GetReadSetActivationJobOutput with field(s):
  • id(Option<String>):

    The job’s ID.

  • sequence_store_id(Option<String>):

    The job’s sequence store ID.

  • status(Option<ReadSetActivationJobStatus>):

    The job’s status.

  • status_message(Option<String>):

    The job’s status message.

  • creation_time(Option<DateTime>):

    When the job was created.

  • completion_time(Option<DateTime>):

    When the job completed.

  • sources(Option<Vec<ActivateReadSetSourceItem>>):

    The job’s source files.

• On failure, responds with SdkError<GetReadSetActivationJobError>

impl Client

pub fn get_read_set_export_job(&self) -> GetReadSetExportJobFluentBuilder

Constructs a fluent builder for the GetReadSetExportJob operation.

• The fluent builder is configurable:
  • sequence_store_id(impl Into<String>) / set_sequence_store_id(Option<String>):

    The job’s sequence store ID.

  • id(impl Into<String>) / set_id(Option<String>):

    The job’s ID.

• On success, responds with GetReadSetExportJobOutput with field(s):
  • id(Option<String>):

    The job’s ID.

  • sequence_store_id(Option<String>):

    The job’s sequence store ID.

  • destination(Option<String>):

    The job’s destination in Amazon S3.

  • status(Option<ReadSetExportJobStatus>):

    The job’s status.

  • status_message(Option<String>):

    The job’s status message.

  • creation_time(Option<DateTime>):

    When the job was created.

  • completion_time(Option<DateTime>):

    When the job completed.

  • read_sets(Option<Vec<ExportReadSetDetail>>):

    The job’s read sets.

• On failure, responds with SdkError<GetReadSetExportJobError>

impl Client

pub fn get_read_set_import_job(&self) -> GetReadSetImportJobFluentBuilder

Constructs a fluent builder for the GetReadSetImportJob operation.

• The fluent builder is configurable:
  • id(impl Into<String>) / set_id(Option<String>):

    The job’s ID.

  • sequence_store_id(impl Into<String>) / set_sequence_store_id(Option<String>):

    The job’s sequence store ID.

• On success, responds with GetReadSetImportJobOutput with field(s):
  • id(Option<String>):

    The job’s ID.

  • sequence_store_id(Option<String>):

    The job’s sequence store ID.

  • role_arn(Option<String>):

    The job’s service role ARN.

  • status(Option<ReadSetImportJobStatus>):

    The job’s status.

  • status_message(Option<String>):

    The job’s status message.

  • creation_time(Option<DateTime>):

    When the job was created.

  • completion_time(Option<DateTime>):

    When the job completed.

  • sources(Option<Vec<ImportReadSetSourceItem>>):

    The job’s source files.

• On failure, responds with SdkError<GetReadSetImportJobError>

impl Client

pub fn get_read_set_metadata(&self) -> GetReadSetMetadataFluentBuilder

Constructs a fluent builder for the GetReadSetMetadata operation.

• The fluent builder is configurable:
  • id(impl Into<String>) / set_id(Option<String>):

    The read set’s ID.

  • sequence_store_id(impl Into<String>) / set_sequence_store_id(Option<String>):

    The read set’s sequence store ID.

• On success, responds with GetReadSetMetadataOutput with field(s):
  • id(Option<String>):

    The read set’s ID.

  • arn(Option<String>):

    The read set’s ARN.

  • sequence_store_id(Option<String>):

    The read set’s sequence store ID.

  • subject_id(Option<String>):

    The read set’s subject ID.

  • sample_id(Option<String>):

    The read set’s sample ID.

  • status(Option<ReadSetStatus>):

    The read set’s status.

  • name(Option<String>):

    The read set’s name.

  • description(Option<String>):

    The read set’s description.

  • file_type(Option<FileType>):

    The read set’s file type.

  • creation_time(Option<DateTime>):

    When the read set was created.

  • sequence_information(Option<SequenceInformation>):

    The read set’s sequence information.

  • reference_arn(Option<String>):

    The read set’s genome reference ARN.

  • files(Option<ReadSetFiles>):

    The read set’s files.

  • status_message(Option<String>):

    The status message for a read set. It provides more detail as to why the read set has a status.

• On failure, responds with SdkError<GetReadSetMetadataError>

impl Client

pub fn get_reference(&self) -> GetReferenceFluentBuilder

Constructs a fluent builder for the GetReference operation.

• The fluent builder is configurable:
  • id(impl Into<String>) / set_id(Option<String>):

    The reference’s ID.

  • reference_store_id(impl Into<String>) / set_reference_store_id(Option<String>):

    The reference’s store ID.

  • range(impl Into<String>) / set_range(Option<String>):

    The range to retrieve.

  • part_number(i32) / set_part_number(Option<i32>):

    The part number to retrieve.

  • file(ReferenceFile) / set_file(Option<ReferenceFile>):

    The file to retrieve.

• On success, responds with GetReferenceOutput with field(s):
  • payload(ByteStream):

    The reference file payload.

• On failure, responds with SdkError<GetReferenceError>

impl Client

pub fn get_reference_import_job(&self) -> GetReferenceImportJobFluentBuilder

Constructs a fluent builder for the GetReferenceImportJob operation.

• The fluent builder is configurable:
  • id(impl Into<String>) / set_id(Option<String>):

    The job’s ID.

  • reference_store_id(impl Into<String>) / set_reference_store_id(Option<String>):

    The job’s reference store ID.

• On success, responds with GetReferenceImportJobOutput with field(s):
  • id(Option<String>):

    The job’s ID.

  • reference_store_id(Option<String>):

    The job’s reference store ID.

  • role_arn(Option<String>):

    The job’s service role ARN.

  • status(Option<ReferenceImportJobStatus>):

    The job’s status.

  • status_message(Option<String>):

    The job’s status message.

  • creation_time(Option<DateTime>):

    When the job was created.

  • completion_time(Option<DateTime>):

    When the job completed.

  • sources(Option<Vec<ImportReferenceSourceItem>>):

    The job’s source files.

• On failure, responds with SdkError<GetReferenceImportJobError>

impl Client

pub fn get_reference_metadata(&self) -> GetReferenceMetadataFluentBuilder

Constructs a fluent builder for the GetReferenceMetadata operation.

• The fluent builder is configurable:
  • id(impl Into<String>) / set_id(Option<String>):

    The reference’s ID.

  • reference_store_id(impl Into<String>) / set_reference_store_id(Option<String>):

    The reference’s reference store ID.

• On success, responds with GetReferenceMetadataOutput with field(s):
  • id(Option<String>):

    The reference’s ID.

  • arn(Option<String>):

    The reference’s ARN.

  • reference_store_id(Option<String>):

    The reference’s reference store ID.

  • md5(Option<String>):

    The reference’s MD5 checksum.

  • status(Option<ReferenceStatus>):

    The reference’s status.

  • name(Option<String>):

    The reference’s name.

  • description(Option<String>):

    The reference’s description.

  • creation_time(Option<DateTime>):

    When the reference was created.

  • update_time(Option<DateTime>):

    When the reference was updated.

  • files(Option<ReferenceFiles>):

    The reference’s files.

• On failure, responds with SdkError<GetReferenceMetadataError>

impl Client

pub fn get_reference_store(&self) -> GetReferenceStoreFluentBuilder

Constructs a fluent builder for the GetReferenceStore operation.

• The fluent builder is configurable:
  • id(impl Into<String>) / set_id(Option<String>):

    The store’s ID.

• On success, responds with GetReferenceStoreOutput with field(s):
  • id(Option<String>):

    The store’s ID.

  • arn(Option<String>):

    The store’s ARN.

  • name(Option<String>):

    The store’s name.

  • description(Option<String>):

    The store’s description.

  • sse_config(Option<SseConfig>):

    The store’s server-side encryption (SSE) settings.

  • creation_time(Option<DateTime>):

    When the store was created.

• On failure, responds with SdkError<GetReferenceStoreError>

impl Client

pub fn get_run(&self) -> GetRunFluentBuilder

Constructs a fluent builder for the GetRun operation.

• The fluent builder is configurable:
  • id(impl Into<String>) / set_id(Option<String>):

    The run’s ID.

  • export(RunExport) / set_export(Option<Vec<RunExport>>):

    The run’s export format.

• On success, responds with GetRunOutput with field(s):
  • arn(Option<String>):

    The run’s ARN.

  • id(Option<String>):

    The run’s ID.

  • status(Option<RunStatus>):

    The run’s status.

  • workflow_id(Option<String>):

    The run’s workflow ID.

  • workflow_type(Option<WorkflowType>):

    The run’s workflow type.

  • run_id(Option<String>):

    The run’s ID.

  • role_arn(Option<String>):

    The run’s service role ARN.

  • name(Option<String>):

    The run’s name.

  • run_group_id(Option<String>):

    The run’s group ID.

  • priority(Option<i32>):

    The run’s priority.

  • definition(Option<String>):

    The run’s definition.

  • digest(Option<String>):

    The run’s digest.

  • parameters(Option<Document>):

    The run’s parameters.

  • storage_capacity(Option<i32>):

    The run’s storage capacity in gigabytes.

  • output_uri(Option<String>):

    The run’s output URI.

  • log_level(Option<RunLogLevel>):

    The run’s log level.

  • resource_digests(Option<HashMap<String, String>>):

    The run’s resource digests.

  • started_by(Option<String>):

    Who started the run.

  • creation_time(Option<DateTime>):

    When the run was created.

  • start_time(Option<DateTime>):

    When the run started.

  • stop_time(Option<DateTime>):

    The run’s stop time.

  • status_message(Option<String>):

    The run’s status message.

  • tags(Option<HashMap<String, String>>):

    The run’s tags.

  • accelerators(Option<Accelerators>):

    The computational accelerator used to run the workflow.

• On failure, responds with SdkError<GetRunError>

impl Client

pub fn get_run_group(&self) -> GetRunGroupFluentBuilder

Constructs a fluent builder for the GetRunGroup operation.

• The fluent builder is configurable:
  • id(impl Into<String>) / set_id(Option<String>):

    The group’s ID.

• On success, responds with GetRunGroupOutput with field(s):
  • arn(Option<String>):

    The group’s ARN.

  • id(Option<String>):

    The group’s ID.

  • name(Option<String>):

    The group’s name.

  • max_cpus(Option<i32>):

    The group’s maximum number of CPUs to use.

  • max_runs(Option<i32>):

    The maximum number of concurrent runs for the group.

  • max_duration(Option<i32>):

    The group’s maximum run time in minutes.

  • creation_time(Option<DateTime>):

    When the group was created.

  • tags(Option<HashMap<String, String>>):

    The group’s tags.

  • max_gpus(Option<i32>):

    The maximum GPUs that can be used by a run group.

• On failure, responds with SdkError<GetRunGroupError>

impl Client

pub fn get_run_task(&self) -> GetRunTaskFluentBuilder

Constructs a fluent builder for the GetRunTask operation.

• The fluent builder is configurable:
  • id(impl Into<String>) / set_id(Option<String>):

    The task’s ID.

  • task_id(impl Into<String>) / set_task_id(Option<String>):

    The task’s ID.

• On success, responds with GetRunTaskOutput with field(s):
  • task_id(Option<String>):

    The task’s ID.

  • status(Option<TaskStatus>):

    The task’s status.

  • name(Option<String>):

    The task’s name.

  • cpus(Option<i32>):

    The task’s CPU usage.

  • memory(Option<i32>):

    The task’s memory use in gigabytes.

  • creation_time(Option<DateTime>):

    When the task was created.

  • start_time(Option<DateTime>):

    The task’s start time.

  • stop_time(Option<DateTime>):

    The task’s stop time.

  • status_message(Option<String>):

    The task’s status message.

  • log_stream(Option<String>):

    The task’s log stream.

  • gpus(Option<i32>):

    The number of Graphics Processing Units (GPU) specified in the task.

• On failure, responds with SdkError<GetRunTaskError>

impl Client

pub fn get_sequence_store(&self) -> GetSequenceStoreFluentBuilder

Constructs a fluent builder for the GetSequenceStore operation.

• The fluent builder is configurable:
  • id(impl Into<String>) / set_id(Option<String>):

    The store’s ID.

• On success, responds with GetSequenceStoreOutput with field(s):
  • id(Option<String>):

    The store’s ID.

  • arn(Option<String>):

    The store’s ARN.

  • name(Option<String>):

    The store’s name.

  • description(Option<String>):

    The store’s description.

  • sse_config(Option<SseConfig>):

    The store’s server-side encryption (SSE) settings.

  • creation_time(Option<DateTime>):

    When the store was created.

  • fallback_location(Option<String>):

    An S3 location that is used to store files that have failed a direct upload.

• On failure, responds with SdkError<GetSequenceStoreError>

impl Client

pub fn get_variant_import_job(&self) -> GetVariantImportJobFluentBuilder

Constructs a fluent builder for the GetVariantImportJob operation.

• The fluent builder is configurable:
  • job_id(impl Into<String>) / set_job_id(Option<String>):

    The job’s ID.

• On success, responds with GetVariantImportJobOutput with field(s):
  • id(Option<String>):

    The job’s ID.

  • destination_name(Option<String>):

    The job’s destination variant store.

  • role_arn(Option<String>):

    The job’s service role ARN.

  • status(Option<JobStatus>):

    The job’s status.

  • status_message(Option<String>):

    The job’s status message.

  • creation_time(Option<DateTime>):

    When the job was created.

  • update_time(Option<DateTime>):

    When the job was updated.

  • completion_time(Option<DateTime>):

    When the job completed.

  • items(Option<Vec<VariantImportItemDetail>>):

    The job’s items.

  • run_left_normalization(bool):

    The job’s left normalization setting.

  • annotation_fields(Option<HashMap<String, String>>):

    The annotation schema generated by the parsed annotation data.

• On failure, responds with SdkError<GetVariantImportJobError>

impl Client

pub fn get_variant_store(&self) -> GetVariantStoreFluentBuilder

Constructs a fluent builder for the GetVariantStore operation.

• The fluent builder is configurable:
  • name(impl Into<String>) / set_name(Option<String>):

    The store’s name.

• On success, responds with GetVariantStoreOutput with field(s):
  • id(Option<String>):

    The store’s ID.

  • reference(Option<ReferenceItem>):

    The store’s genome reference.

  • status(Option<StoreStatus>):

    The store’s status.

  • store_arn(Option<String>):

    The store’s ARN.

  • name(Option<String>):

    The store’s name.

  • description(Option<String>):

    The store’s description.

  • sse_config(Option<SseConfig>):

    The store’s server-side encryption (SSE) settings.

  • creation_time(Option<DateTime>):

    When the store was created.

  • update_time(Option<DateTime>):

    When the store was updated.

  • tags(Option<HashMap<String, String>>):

    The store’s tags.

  • status_message(Option<String>):

    The store’s status message.

  • store_size_bytes(Option<i64>):

    The store’s size in bytes.

• On failure, responds with SdkError<GetVariantStoreError>

impl Client

pub fn get_workflow(&self) -> GetWorkflowFluentBuilder

Constructs a fluent builder for the GetWorkflow operation.

• The fluent builder is configurable:
  • id(impl Into<String>) / set_id(Option<String>):

    The workflow’s ID.

  • r#type(WorkflowType) / set_type(Option<WorkflowType>):

    The workflow’s type.

  • export(WorkflowExport) / set_export(Option<Vec<WorkflowExport>>):

    The export format for the workflow.

• On success, responds with GetWorkflowOutput with field(s):
  • arn(Option<String>):

    The workflow’s ARN.

  • id(Option<String>):

    The workflow’s ID.

  • status(Option<WorkflowStatus>):

    The workflow’s status.

  • r#type(Option<WorkflowType>):

    The workflow’s type.

  • name(Option<String>):

    The workflow’s name.

  • description(Option<String>):

    The workflow’s description.

  • engine(Option<WorkflowEngine>):

    The workflow’s engine.

  • definition(Option<String>):

    The workflow’s definition.

  • main(Option<String>):

    The path of the main definition file for the workflow.

  • digest(Option<String>):

    The workflow’s digest.

  • parameter_template(Option<HashMap<String, WorkflowParameter>>):

    The workflow’s parameter template.

  • storage_capacity(Option<i32>):

    The workflow’s storage capacity in gigabytes.

  • creation_time(Option<DateTime>):

    When the workflow was created.

  • status_message(Option<String>):

    The workflow’s status message.

  • tags(Option<HashMap<String, String>>):

    The workflow’s tags.

  • metadata(Option<HashMap<String, String>>):

    Gets metadata for workflow.

  • accelerators(Option<Accelerators>):

    The computational accelerator specified to run the workflow.

• On failure, responds with SdkError<GetWorkflowError>

impl Client

pub fn list_annotation_import_jobs( &self ) -> ListAnnotationImportJobsFluentBuilder

Constructs a fluent builder for the ListAnnotationImportJobs operation. This operation supports pagination; See into_paginator().

• The fluent builder is configurable:
  • max_results(i32) / set_max_results(Option<i32>):

    The maximum number of jobs to return in one page of results.

  • ids(impl Into<String>) / set_ids(Option<Vec<String>>):

    IDs of annotation import jobs to retrieve.

  • next_token(impl Into<String>) / set_next_token(Option<String>):

    Specify the pagination token from a previous request to retrieve the next page of results.

  • filter(ListAnnotationImportJobsFilter) / set_filter(Option<ListAnnotationImportJobsFilter>):

    A filter to apply to the list.

• On success, responds with ListAnnotationImportJobsOutput with field(s):
  • annotation_import_jobs(Option<Vec<AnnotationImportJobItem>>):

    A list of jobs.

  • next_token(Option<String>):

    A pagination token that’s included if more results are available.

• On failure, responds with SdkError<ListAnnotationImportJobsError>

impl Client

pub fn list_annotation_stores(&self) -> ListAnnotationStoresFluentBuilder

Constructs a fluent builder for the ListAnnotationStores operation. This operation supports pagination; See into_paginator().

• The fluent builder is configurable:
  • ids(impl Into<String>) / set_ids(Option<Vec<String>>):

    IDs of stores to list.

  • max_results(i32) / set_max_results(Option<i32>):

    The maximum number of stores to return in one page of results.

  • next_token(impl Into<String>) / set_next_token(Option<String>):

    Specify the pagination token from a previous request to retrieve the next page of results.

  • filter(ListAnnotationStoresFilter) / set_filter(Option<ListAnnotationStoresFilter>):

    A filter to apply to the list.

• On success, responds with ListAnnotationStoresOutput with field(s):
  • annotation_stores(Option<Vec<AnnotationStoreItem>>):

    A list of stores.

  • next_token(Option<String>):

    A pagination token that’s included if more results are available.

• On failure, responds with SdkError<ListAnnotationStoresError>

impl Client

pub fn list_multipart_read_set_uploads( &self ) -> ListMultipartReadSetUploadsFluentBuilder

Constructs a fluent builder for the ListMultipartReadSetUploads operation. This operation supports pagination; See into_paginator().

• The fluent builder is configurable:
  • sequence_store_id(impl Into<String>) / set_sequence_store_id(Option<String>):

    The Sequence Store ID used for the multipart uploads.

  • max_results(i32) / set_max_results(Option<i32>):

    The maximum number of multipart uploads returned in a page.

  • next_token(impl Into<String>) / set_next_token(Option<String>):

    Next token returned in the response of a previous ListMultipartReadSetUploads call. Used to get the next page of results.

• On success, responds with ListMultipartReadSetUploadsOutput with field(s):
  • next_token(Option<String>):

    Next token returned in the response of a previous ListMultipartReadSetUploads call. Used to get the next page of results.

  • uploads(Option<Vec<MultipartReadSetUploadListItem>>):

    An array of multipart uploads.

• On failure, responds with SdkError<ListMultipartReadSetUploadsError>

impl Client

pub fn list_read_set_activation_jobs( &self ) -> ListReadSetActivationJobsFluentBuilder

Constructs a fluent builder for the ListReadSetActivationJobs operation. This operation supports pagination; See into_paginator().

• The fluent builder is configurable:
  • sequence_store_id(impl Into<String>) / set_sequence_store_id(Option<String>):

    The read set’s sequence store ID.

  • max_results(i32) / set_max_results(Option<i32>):

    The maximum number of read set activation jobs to return in one page of results.

  • next_token(impl Into<String>) / set_next_token(Option<String>):

    Specify the pagination token from a previous request to retrieve the next page of results.

  • filter(ActivateReadSetFilter) / set_filter(Option<ActivateReadSetFilter>):

    A filter to apply to the list.

• On success, responds with ListReadSetActivationJobsOutput with field(s):
  • next_token(Option<String>):

    A pagination token that’s included if more results are available.

  • activation_jobs(Option<Vec<ActivateReadSetJobItem>>):

    A list of jobs.

• On failure, responds with SdkError<ListReadSetActivationJobsError>

impl Client

pub fn list_read_set_export_jobs(&self) -> ListReadSetExportJobsFluentBuilder

Constructs a fluent builder for the ListReadSetExportJobs operation. This operation supports pagination; See into_paginator().

• The fluent builder is configurable:
  • sequence_store_id(impl Into<String>) / set_sequence_store_id(Option<String>):

    The jobs’ sequence store ID.

  • max_results(i32) / set_max_results(Option<i32>):

    The maximum number of jobs to return in one page of results.

  • next_token(impl Into<String>) / set_next_token(Option<String>):

    Specify the pagination token from a previous request to retrieve the next page of results.

  • filter(ExportReadSetFilter) / set_filter(Option<ExportReadSetFilter>):

    A filter to apply to the list.

• On success, responds with ListReadSetExportJobsOutput with field(s):
  • next_token(Option<String>):

    A pagination token that’s included if more results are available.

  • export_jobs(Option<Vec<ExportReadSetJobDetail>>):

    A list of jobs.

• On failure, responds with SdkError<ListReadSetExportJobsError>

impl Client

pub fn list_read_set_import_jobs(&self) -> ListReadSetImportJobsFluentBuilder

Constructs a fluent builder for the ListReadSetImportJobs operation. This operation supports pagination; See into_paginator().

• The fluent builder is configurable:
  • max_results(i32) / set_max_results(Option<i32>):

    The maximum number of jobs to return in one page of results.

  • next_token(impl Into<String>) / set_next_token(Option<String>):

    Specify the pagination token from a previous request to retrieve the next page of results.

  • sequence_store_id(impl Into<String>) / set_sequence_store_id(Option<String>):

    The jobs’ sequence store ID.

  • filter(ImportReadSetFilter) / set_filter(Option<ImportReadSetFilter>):

    A filter to apply to the list.

• On success, responds with ListReadSetImportJobsOutput with field(s):
  • next_token(Option<String>):

    A pagination token that’s included if more results are available.

  • import_jobs(Option<Vec<ImportReadSetJobItem>>):

    A list of jobs.

• On failure, responds with SdkError<ListReadSetImportJobsError>

impl Client

pub fn list_read_set_upload_parts(&self) -> ListReadSetUploadPartsFluentBuilder

Constructs a fluent builder for the ListReadSetUploadParts operation. This operation supports pagination; See into_paginator().

• The fluent builder is configurable:
  • sequence_store_id(impl Into<String>) / set_sequence_store_id(Option<String>):

    The Sequence Store ID used for the multipart uploads.

  • upload_id(impl Into<String>) / set_upload_id(Option<String>):

    The ID for the initiated multipart upload.

  • part_source(ReadSetPartSource) / set_part_source(Option<ReadSetPartSource>):

    The source file for the upload part.

  • max_results(i32) / set_max_results(Option<i32>):

    The maximum number of read set upload parts returned in a page.

  • next_token(impl Into<String>) / set_next_token(Option<String>):

    Next token returned in the response of a previous ListReadSetUploadPartsRequest call. Used to get the next page of results.

  • filter(ReadSetUploadPartListFilter) / set_filter(Option<ReadSetUploadPartListFilter>):

    Attributes used to filter for a specific subset of read set part uploads.

• On success, responds with ListReadSetUploadPartsOutput with field(s):
  • next_token(Option<String>):

    Next token returned in the response of a previous ListReadSetUploadParts call. Used to get the next page of results.

  • parts(Option<Vec<ReadSetUploadPartListItem>>):

    An array of upload parts.

• On failure, responds with SdkError<ListReadSetUploadPartsError>

impl Client

pub fn list_read_sets(&self) -> ListReadSetsFluentBuilder

Constructs a fluent builder for the ListReadSets operation. This operation supports pagination; See into_paginator().

• The fluent builder is configurable:
  • sequence_store_id(impl Into<String>) / set_sequence_store_id(Option<String>):

    The jobs’ sequence store ID.

  • max_results(i32) / set_max_results(Option<i32>):

    The maximum number of read sets to return in one page of results.

  • next_token(impl Into<String>) / set_next_token(Option<String>):

    Specify the pagination token from a previous request to retrieve the next page of results.

  • filter(ReadSetFilter) / set_filter(Option<ReadSetFilter>):

    A filter to apply to the list.

• On success, responds with ListReadSetsOutput with field(s):
  • next_token(Option<String>):

    A pagination token that’s included if more results are available.

  • read_sets(Option<Vec<ReadSetListItem>>):

    A list of read sets.

• On failure, responds with SdkError<ListReadSetsError>

impl Client

pub fn list_reference_import_jobs(&self) -> ListReferenceImportJobsFluentBuilder

Constructs a fluent builder for the ListReferenceImportJobs operation. This operation supports pagination; See into_paginator().

• The fluent builder is configurable:
  • max_results(i32) / set_max_results(Option<i32>):

    The maximum number of jobs to return in one page of results.

  • next_token(impl Into<String>) / set_next_token(Option<String>):

    Specify the pagination token from a previous request to retrieve the next page of results.

  • reference_store_id(impl Into<String>) / set_reference_store_id(Option<String>):

    The job’s reference store ID.

  • filter(ImportReferenceFilter) / set_filter(Option<ImportReferenceFilter>):

    A filter to apply to the list.

• On success, responds with ListReferenceImportJobsOutput with field(s):
  • next_token(Option<String>):

    A pagination token that’s included if more results are available.

  • import_jobs(Option<Vec<ImportReferenceJobItem>>):

    A lis of jobs.

• On failure, responds with SdkError<ListReferenceImportJobsError>

impl Client

pub fn list_reference_stores(&self) -> ListReferenceStoresFluentBuilder

Constructs a fluent builder for the ListReferenceStores operation. This operation supports pagination; See into_paginator().

• The fluent builder is configurable:
  • max_results(i32) / set_max_results(Option<i32>):

    The maximum number of stores to return in one page of results.

  • next_token(impl Into<String>) / set_next_token(Option<String>):

    Specify the pagination token from a previous request to retrieve the next page of results.

  • filter(ReferenceStoreFilter) / set_filter(Option<ReferenceStoreFilter>):

    A filter to apply to the list.

• On success, responds with ListReferenceStoresOutput with field(s):
  • next_token(Option<String>):

    A pagination token that’s included if more results are available.

  • reference_stores(Option<Vec<ReferenceStoreDetail>>):

    A list of reference stores.

• On failure, responds with SdkError<ListReferenceStoresError>

impl Client

pub fn list_references(&self) -> ListReferencesFluentBuilder

Constructs a fluent builder for the ListReferences operation. This operation supports pagination; See into_paginator().

• The fluent builder is configurable:
  • reference_store_id(impl Into<String>) / set_reference_store_id(Option<String>):

    The references’ reference store ID.

  • max_results(i32) / set_max_results(Option<i32>):

    The maximum number of references to return in one page of results.

  • next_token(impl Into<String>) / set_next_token(Option<String>):

    Specify the pagination token from a previous request to retrieve the next page of results.

  • filter(ReferenceFilter) / set_filter(Option<ReferenceFilter>):

    A filter to apply to the list.

• On success, responds with ListReferencesOutput with field(s):
  • next_token(Option<String>):

    A pagination token that’s included if more results are available.

  • references(Option<Vec<ReferenceListItem>>):

    A list of references.

• On failure, responds with SdkError<ListReferencesError>

impl Client

pub fn list_run_groups(&self) -> ListRunGroupsFluentBuilder

Constructs a fluent builder for the ListRunGroups operation. This operation supports pagination; See into_paginator().

• The fluent builder is configurable:
  • name(impl Into<String>) / set_name(Option<String>):

    The run groups’ name.

  • starting_token(impl Into<String>) / set_starting_token(Option<String>):

    Specify the pagination token from a previous request to retrieve the next page of results.

  • max_results(i32) / set_max_results(Option<i32>):

    The maximum number of run groups to return in one page of results.

• On success, responds with ListRunGroupsOutput with field(s):
  • items(Option<Vec<RunGroupListItem>>):

    A list of groups.

  • next_token(Option<String>):

    A pagination token that’s included if more results are available.

• On failure, responds with SdkError<ListRunGroupsError>

impl Client

pub fn list_run_tasks(&self) -> ListRunTasksFluentBuilder

Constructs a fluent builder for the ListRunTasks operation. This operation supports pagination; See into_paginator().

• The fluent builder is configurable:
  • id(impl Into<String>) / set_id(Option<String>):

    The run’s ID.

  • status(TaskStatus) / set_status(Option<TaskStatus>):

    Filter the list by status.

  • starting_token(impl Into<String>) / set_starting_token(Option<String>):

    Specify the pagination token from a previous request to retrieve the next page of results.

  • max_results(i32) / set_max_results(Option<i32>):

    The maximum number of run tasks to return in one page of results.

• On success, responds with ListRunTasksOutput with field(s):
  • items(Option<Vec<TaskListItem>>):

    A list of tasks.

  • next_token(Option<String>):

    A pagination token that’s included if more results are available.

• On failure, responds with SdkError<ListRunTasksError>

impl Client

pub fn list_runs(&self) -> ListRunsFluentBuilder

Constructs a fluent builder for the ListRuns operation. This operation supports pagination; See into_paginator().

• The fluent builder is configurable:
  • name(impl Into<String>) / set_name(Option<String>):

    Filter the list by run name.

  • run_group_id(impl Into<String>) / set_run_group_id(Option<String>):

    Filter the list by run group ID.

  • starting_token(impl Into<String>) / set_starting_token(Option<String>):

    Specify the pagination token from a previous request to retrieve the next page of results.

  • max_results(i32) / set_max_results(Option<i32>):

    The maximum number of runs to return in one page of results.

  • status(RunStatus) / set_status(Option<RunStatus>):

    The status of a run.

• On success, responds with ListRunsOutput with field(s):
  • items(Option<Vec<RunListItem>>):

    A list of runs.

  • next_token(Option<String>):

    A pagination token that’s included if more results are available.

• On failure, responds with SdkError<ListRunsError>

impl Client

pub fn list_sequence_stores(&self) -> ListSequenceStoresFluentBuilder

Constructs a fluent builder for the ListSequenceStores operation. This operation supports pagination; See into_paginator().

• The fluent builder is configurable:
  • max_results(i32) / set_max_results(Option<i32>):

    The maximum number of stores to return in one page of results.

  • next_token(impl Into<String>) / set_next_token(Option<String>):

    Specify the pagination token from a previous request to retrieve the next page of results.

  • filter(SequenceStoreFilter) / set_filter(Option<SequenceStoreFilter>):

    A filter to apply to the list.

• On success, responds with ListSequenceStoresOutput with field(s):
  • next_token(Option<String>):

    A pagination token that’s included if more results are available.

  • sequence_stores(Option<Vec<SequenceStoreDetail>>):

    A list of sequence stores.

• On failure, responds with SdkError<ListSequenceStoresError>

impl Client

pub fn list_tags_for_resource(&self) -> ListTagsForResourceFluentBuilder

Constructs a fluent builder for the ListTagsForResource operation.

• The fluent builder is configurable:
  • resource_arn(impl Into<String>) / set_resource_arn(Option<String>):

    The resource’s ARN.

• On success, responds with ListTagsForResourceOutput with field(s):
  • tags(Option<HashMap<String, String>>):

    A list of tags.

• On failure, responds with SdkError<ListTagsForResourceError>

impl Client

pub fn list_variant_import_jobs(&self) -> ListVariantImportJobsFluentBuilder

Constructs a fluent builder for the ListVariantImportJobs operation. This operation supports pagination; See into_paginator().

• The fluent builder is configurable:
  • max_results(i32) / set_max_results(Option<i32>):

    The maximum number of import jobs to return in one page of results.

  • ids(impl Into<String>) / set_ids(Option<Vec<String>>):

    A list of job IDs.

  • next_token(impl Into<String>) / set_next_token(Option<String>):

    Specify the pagination token from a previous request to retrieve the next page of results.

  • filter(ListVariantImportJobsFilter) / set_filter(Option<ListVariantImportJobsFilter>):

    A filter to apply to the list.

• On success, responds with ListVariantImportJobsOutput with field(s):
  • variant_import_jobs(Option<Vec<VariantImportJobItem>>):

    A list of jobs.

  • next_token(Option<String>):

    A pagination token that’s included if more results are available.

• On failure, responds with SdkError<ListVariantImportJobsError>

impl Client

pub fn list_variant_stores(&self) -> ListVariantStoresFluentBuilder

Constructs a fluent builder for the ListVariantStores operation. This operation supports pagination; See into_paginator().

• The fluent builder is configurable:
  • max_results(i32) / set_max_results(Option<i32>):

    The maximum number of stores to return in one page of results.

  • ids(impl Into<String>) / set_ids(Option<Vec<String>>):

    A list of store IDs.

  • next_token(impl Into<String>) / set_next_token(Option<String>):

    Specify the pagination token from a previous request to retrieve the next page of results.

  • filter(ListVariantStoresFilter) / set_filter(Option<ListVariantStoresFilter>):

    A filter to apply to the list.

• On success, responds with ListVariantStoresOutput with field(s):
  • variant_stores(Option<Vec<VariantStoreItem>>):

    A list of variant stores.

  • next_token(Option<String>):

    A pagination token that’s included if more results are available.

• On failure, responds with SdkError<ListVariantStoresError>

impl Client

pub fn list_workflows(&self) -> ListWorkflowsFluentBuilder

Constructs a fluent builder for the ListWorkflows operation. This operation supports pagination; See into_paginator().

• The fluent builder is configurable:
  • r#type(WorkflowType) / set_type(Option<WorkflowType>):

    The workflows’ type.

  • name(impl Into<String>) / set_name(Option<String>):

    The workflows’ name.

  • starting_token(impl Into<String>) / set_starting_token(Option<String>):

    Specify the pagination token from a previous request to retrieve the next page of results.

  • max_results(i32) / set_max_results(Option<i32>):

    The maximum number of workflows to return in one page of results.

• On success, responds with ListWorkflowsOutput with field(s):
  • items(Option<Vec<WorkflowListItem>>):

    The workflows’ items.

  • next_token(Option<String>):

    A pagination token that’s included if more results are available.

• On failure, responds with SdkError<ListWorkflowsError>

impl Client

pub fn start_annotation_import_job( &self ) -> StartAnnotationImportJobFluentBuilder

Constructs a fluent builder for the StartAnnotationImportJob operation.

• The fluent builder is configurable:
  • destination_name(impl Into<String>) / set_destination_name(Option<String>):

    A destination annotation store for the job.

  • role_arn(impl Into<String>) / set_role_arn(Option<String>):

    A service role for the job.

  • items(AnnotationImportItemSource) / set_items(Option<Vec<AnnotationImportItemSource>>):

    Items to import.

  • format_options(FormatOptions) / set_format_options(Option<FormatOptions>):

    Formatting options for the annotation file.

  • run_left_normalization(bool) / set_run_left_normalization(Option<bool>):

    The job’s left normalization setting.

  • annotation_fields(impl Into<String>, impl Into<String>) / set_annotation_fields(Option<HashMap<String, String>>):

    The annotation schema generated by the parsed annotation data.

• On success, responds with StartAnnotationImportJobOutput with field(s):
  • job_id(Option<String>):

    The job’s ID.

• On failure, responds with SdkError<StartAnnotationImportJobError>

impl Client

pub fn start_read_set_activation_job( &self ) -> StartReadSetActivationJobFluentBuilder

Constructs a fluent builder for the StartReadSetActivationJob operation.

• The fluent builder is configurable:
  • sequence_store_id(impl Into<String>) / set_sequence_store_id(Option<String>):

    The read set’s sequence store ID.

  • client_token(impl Into<String>) / set_client_token(Option<String>):

    To ensure that jobs don’t run multiple times, specify a unique token for each job.

  • sources(StartReadSetActivationJobSourceItem) / set_sources(Option<Vec<StartReadSetActivationJobSourceItem>>):

    The job’s source files.

• On success, responds with StartReadSetActivationJobOutput with field(s):
  • id(Option<String>):

    The job’s ID.

  • sequence_store_id(Option<String>):

    The read set’s sequence store ID.

  • status(Option<ReadSetActivationJobStatus>):

    The job’s status.

  • creation_time(Option<DateTime>):

    When the job was created.

• On failure, responds with SdkError<StartReadSetActivationJobError>

impl Client

pub fn start_read_set_export_job(&self) -> StartReadSetExportJobFluentBuilder

Constructs a fluent builder for the StartReadSetExportJob operation.

• The fluent builder is configurable:
  • sequence_store_id(impl Into<String>) / set_sequence_store_id(Option<String>):

    The read set’s sequence store ID.

  • destination(impl Into<String>) / set_destination(Option<String>):

    A location for exported files in Amazon S3.

  • role_arn(impl Into<String>) / set_role_arn(Option<String>):

    A service role for the job.

  • client_token(impl Into<String>) / set_client_token(Option<String>):

    To ensure that jobs don’t run multiple times, specify a unique token for each job.

  • sources(ExportReadSet) / set_sources(Option<Vec<ExportReadSet>>):

    The job’s source files.

• On success, responds with StartReadSetExportJobOutput with field(s):
  • id(Option<String>):

    The job’s ID.

  • sequence_store_id(Option<String>):

    The read set’s sequence store ID.

  • destination(Option<String>):

    The job’s output location.

  • status(Option<ReadSetExportJobStatus>):

    The job’s status.

  • creation_time(Option<DateTime>):

    When the job was created.

• On failure, responds with SdkError<StartReadSetExportJobError>

impl Client

pub fn start_read_set_import_job(&self) -> StartReadSetImportJobFluentBuilder

Constructs a fluent builder for the StartReadSetImportJob operation.

• The fluent builder is configurable:
  • sequence_store_id(impl Into<String>) / set_sequence_store_id(Option<String>):

    The read set’s sequence store ID.

  • role_arn(impl Into<String>) / set_role_arn(Option<String>):

    A service role for the job.

  • client_token(impl Into<String>) / set_client_token(Option<String>):

    To ensure that jobs don’t run multiple times, specify a unique token for each job.

  • sources(StartReadSetImportJobSourceItem) / set_sources(Option<Vec<StartReadSetImportJobSourceItem>>):

    The job’s source files.

• On success, responds with StartReadSetImportJobOutput with field(s):
  • id(Option<String>):

    The job’s ID.

  • sequence_store_id(Option<String>):

    The read set’s sequence store ID.

  • role_arn(Option<String>):

    The job’s service role ARN.

  • status(Option<ReadSetImportJobStatus>):

    The job’s status.

  • creation_time(Option<DateTime>):

    When the job was created.

• On failure, responds with SdkError<StartReadSetImportJobError>

impl Client

pub fn start_reference_import_job(&self) -> StartReferenceImportJobFluentBuilder

Constructs a fluent builder for the StartReferenceImportJob operation.

• The fluent builder is configurable:
  • reference_store_id(impl Into<String>) / set_reference_store_id(Option<String>):

    The job’s reference store ID.

  • role_arn(impl Into<String>) / set_role_arn(Option<String>):

    A service role for the job.

  • client_token(impl Into<String>) / set_client_token(Option<String>):

    To ensure that jobs don’t run multiple times, specify a unique token for each job.

  • sources(StartReferenceImportJobSourceItem) / set_sources(Option<Vec<StartReferenceImportJobSourceItem>>):

    The job’s source files.

• On success, responds with StartReferenceImportJobOutput with field(s):
  • id(Option<String>):

    The job’s ID.

  • reference_store_id(Option<String>):

    The job’s reference store ID.

  • role_arn(Option<String>):

    The job’s service role ARN.

  • status(Option<ReferenceImportJobStatus>):

    The job’s status.

  • creation_time(Option<DateTime>):

    When the job was created.

• On failure, responds with SdkError<StartReferenceImportJobError>

impl Client

pub fn start_run(&self) -> StartRunFluentBuilder

Constructs a fluent builder for the StartRun operation.

• The fluent builder is configurable:
  • workflow_id(impl Into<String>) / set_workflow_id(Option<String>):

    The run’s workflow ID.

  • workflow_type(WorkflowType) / set_workflow_type(Option<WorkflowType>):

    The run’s workflows type.

  • run_id(impl Into<String>) / set_run_id(Option<String>):

    The run’s ID.

  • role_arn(impl Into<String>) / set_role_arn(Option<String>):

    A service role for the run.

  • name(impl Into<String>) / set_name(Option<String>):

    A name for the run.

  • run_group_id(impl Into<String>) / set_run_group_id(Option<String>):

    The run’s group ID.

  • priority(i32) / set_priority(Option<i32>):

    A priority for the run.

  • parameters(Document) / set_parameters(Option<Document>):

    Parameters for the run.

  • storage_capacity(i32) / set_storage_capacity(Option<i32>):

    A storage capacity for the run in gigabytes.

  • output_uri(impl Into<String>) / set_output_uri(Option<String>):

    An output URI for the run.

  • log_level(RunLogLevel) / set_log_level(Option<RunLogLevel>):

    A log level for the run.

  • tags(impl Into<String>, impl Into<String>) / set_tags(Option<HashMap<String, String>>):

    Tags for the run.

  • request_id(impl Into<String>) / set_request_id(Option<String>):

    To ensure that requests don’t run multiple times, specify a unique ID for each request.

• On success, responds with StartRunOutput with field(s):
  • arn(Option<String>):

    The run’s ARN.

  • id(Option<String>):

    The run’s ID.

  • status(Option<RunStatus>):

    The run’s status.

  • tags(Option<HashMap<String, String>>):

    The run’s tags.

• On failure, responds with SdkError<StartRunError>

impl Client

pub fn start_variant_import_job(&self) -> StartVariantImportJobFluentBuilder

Constructs a fluent builder for the StartVariantImportJob operation.

• The fluent builder is configurable:
  • destination_name(impl Into<String>) / set_destination_name(Option<String>):

    The destination variant store for the job.

  • role_arn(impl Into<String>) / set_role_arn(Option<String>):

    A service role for the job.

  • items(VariantImportItemSource) / set_items(Option<Vec<VariantImportItemSource>>):

    Items to import.

  • run_left_normalization(bool) / set_run_left_normalization(Option<bool>):

    The job’s left normalization setting.

  • annotation_fields(impl Into<String>, impl Into<String>) / set_annotation_fields(Option<HashMap<String, String>>):

    The annotation schema generated by the parsed annotation data.

• On success, responds with StartVariantImportJobOutput with field(s):
  • job_id(Option<String>):

    The job’s ID.

• On failure, responds with SdkError<StartVariantImportJobError>

impl Client

pub fn tag_resource(&self) -> TagResourceFluentBuilder

Constructs a fluent builder for the TagResource operation.

• The fluent builder is configurable:
  • resource_arn(impl Into<String>) / set_resource_arn(Option<String>):

    The resource’s ARN.

  • tags(impl Into<String>, impl Into<String>) / set_tags(Option<HashMap<String, String>>):

    Tags for the resource.

• On success, responds with TagResourceOutput
• On failure, responds with SdkError<TagResourceError>

impl Client

pub fn untag_resource(&self) -> UntagResourceFluentBuilder

Constructs a fluent builder for the UntagResource operation.

• The fluent builder is configurable:
  • resource_arn(impl Into<String>) / set_resource_arn(Option<String>):

    The resource’s ARN.

  • tag_keys(impl Into<String>) / set_tag_keys(Option<Vec<String>>):

    Keys of tags to remove.

• On success, responds with UntagResourceOutput
• On failure, responds with SdkError<UntagResourceError>

impl Client

pub fn update_annotation_store(&self) -> UpdateAnnotationStoreFluentBuilder

Constructs a fluent builder for the UpdateAnnotationStore operation.

• The fluent builder is configurable:
  • name(impl Into<String>) / set_name(Option<String>):

    A name for the store.

  • description(impl Into<String>) / set_description(Option<String>):

    A description for the store.

• On success, responds with UpdateAnnotationStoreOutput with field(s):
  • id(Option<String>):

    The store’s ID.

  • reference(Option<ReferenceItem>):

    The store’s genome reference.

  • status(Option<StoreStatus>):

    The store’s status.

  • name(Option<String>):

    The store’s name.

  • description(Option<String>):

    The store’s description.

  • creation_time(Option<DateTime>):

    When the store was created.

  • update_time(Option<DateTime>):

    When the store was updated.

  • store_options(Option<StoreOptions>):

    Parsing options for the store.

  • store_format(Option<StoreFormat>):

    The annotation file format of the store.

• On failure, responds with SdkError<UpdateAnnotationStoreError>

impl Client

pub fn update_run_group(&self) -> UpdateRunGroupFluentBuilder

Constructs a fluent builder for the UpdateRunGroup operation.

• The fluent builder is configurable:
  • id(impl Into<String>) / set_id(Option<String>):

    The group’s ID.

  • name(impl Into<String>) / set_name(Option<String>):

    A name for the group.

  • max_cpus(i32) / set_max_cpus(Option<i32>):

    The maximum number of CPUs to use.

  • max_runs(i32) / set_max_runs(Option<i32>):

    The maximum number of concurrent runs for the group.

  • max_duration(i32) / set_max_duration(Option<i32>):

    A maximum run time for the group in minutes.

  • max_gpus(i32) / set_max_gpus(Option<i32>):

    The maximum GPUs that can be used by a run group.

• On success, responds with UpdateRunGroupOutput
• On failure, responds with SdkError<UpdateRunGroupError>

impl Client

pub fn update_variant_store(&self) -> UpdateVariantStoreFluentBuilder

Constructs a fluent builder for the UpdateVariantStore operation.

• The fluent builder is configurable:
  • name(impl Into<String>) / set_name(Option<String>):

    A name for the store.

  • description(impl Into<String>) / set_description(Option<String>):

    A description for the store.

• On success, responds with UpdateVariantStoreOutput with field(s):
  • id(Option<String>):

    The store’s ID.

  • reference(Option<ReferenceItem>):

    The store’s genome reference.

  • status(Option<StoreStatus>):

    The store’s status.

  • name(Option<String>):

    The store’s name.

  • description(Option<String>):

    The store’s description.

  • creation_time(Option<DateTime>):

    When the store was created.

  • update_time(Option<DateTime>):

    When the store was updated.

• On failure, responds with SdkError<UpdateVariantStoreError>

impl Client

pub fn update_workflow(&self) -> UpdateWorkflowFluentBuilder

Constructs a fluent builder for the UpdateWorkflow operation.

• The fluent builder is configurable:
  • id(impl Into<String>) / set_id(Option<String>):

    The workflow’s ID.

  • name(impl Into<String>) / set_name(Option<String>):

    A name for the workflow.

  • description(impl Into<String>) / set_description(Option<String>):

    A description for the workflow.

• On success, responds with UpdateWorkflowOutput
• On failure, responds with SdkError<UpdateWorkflowError>

impl Client

pub fn upload_read_set_part(&self) -> UploadReadSetPartFluentBuilder

Constructs a fluent builder for the UploadReadSetPart operation.

• The fluent builder is configurable:
  • sequence_store_id(impl Into<String>) / set_sequence_store_id(Option<String>):

    The Sequence Store ID used for the multipart upload.

  • upload_id(impl Into<String>) / set_upload_id(Option<String>):

    The ID for the initiated multipart upload.

  • part_source(ReadSetPartSource) / set_part_source(Option<ReadSetPartSource>):

    The source file for an upload part.

  • part_number(i32) / set_part_number(Option<i32>):

    The number of the part being uploaded.

  • payload(ByteStream) / set_payload(ByteStream):

    The read set data to upload for a part.

• On success, responds with UploadReadSetPartOutput with field(s):
  • checksum(Option<String>):

    An identifier used to confirm that parts are being added to the intended upload.

• On failure, responds with SdkError<UploadReadSetPartError>

impl Client

pub fn from_conf(conf: Config) -> Self

Creates a new client from the service Config.

Panics

This method will panic if the conf has retry or timeouts enabled without a sleep_impl. If you experience this panic, it can be fixed by setting the sleep_impl, or by disabling retries and timeouts.

pub fn config(&self) -> &Config

Returns the client’s configuration.

impl Client

pub fn new(sdk_config: &SdkConfig) -> Self

Creates a new client from an SDK Config.

Panics

• This method will panic if the sdk_config is missing an async sleep implementation. If you experience this panic, set the sleep_impl on the Config passed into this function to fix it.
• This method will panic if the sdk_config is missing an HTTP connector. If you experience this panic, set the http_connector on the Config passed into this function to fix it.

Trait Implementations

impl Clone for Client

fn clone(&self) -> Client

Returns a copy of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for Client

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.