List of all items

Structs

• SingleChannelAlignRes
• SubreadsAndSmc
• params::AlignParams
• params::IndexParams
• params::InputFilterParams
• params::MapParams
• params::OupParams
• read_info::ReadInfo
• reporter::ChannelReporter
• reporter::Reporter
• reporter::SbrReporter
• sbr_and_ref_to_cs::MsaResult

Traits

• params::TOverrideAlignerParam

Functions

• align_sbr_to_smc
• align_sbr_to_smc_worker
• draw_aligned_seq
• mapping2record::build_bam_record_from_mapping
• sbr_and_cs_to_cs::align_sbr_and_fake_cs_to_cs_worker
• sbr_and_ref_to_cs::align_sbr_and_ref_to_cs_worker
• sbr_and_ref_to_cs::build_msa_result_from_records
• subreads_and_smc_generator

Type Aliases

• mapping2record::BamReader
• mapping2record::BamRecord
• mapping2record::BamWriter