Crate opentimstdf 

OpenTimsTDF - Rust reader for timsTOF .d/ (TDF) mass spectrometry bundles.

The format and codecs are documented in the repository under docs/docs/format/, published at https://sigilweaver.app/opentimstdf/docs/. Both compression codecs are supported:

• Codec 2 (TimsCompressionType == 2) - byte-transposed delta-TOF over zstd. Used by modern acquisitions.
• Codec 1 (TimsCompressionType == 1) - per-scan LZF blobs with a signed-int32 delta stream. Used by older acquisitions (e.g. PXD022216).

Re-exports

pub use calibration::BundleCalibration;

pub use calibration::Calibration;

pub use calibration::MobilityConversion;

pub use calibration::MzCalibrationModel;

pub use calibration::MzCalibrationStatus;

pub use calibration::MzConversion;

pub use calibration::TablesMzModel;

pub use codec::checked_block_len;

pub use codec::decode_codec1;

pub use codec::decode_codec2;

pub use error::Error;

pub use error::Result;

pub use error::SqliteError;

pub use reader::Reader;

pub use types::DiaFrameWindows;

pub use types::DiaWindow;

pub use types::Frame;

pub use types::Metadata;

pub use types::PasefMsMsInfo;

pub use types::Peak;

pub use types::Precursor;

pub use types::PrmMsMsInfo;

pub use types::PrmTarget;

Modules

calibration

TOF index <-> m/z and scan index <-> 1/K0 conversion.

codec

error

mzml

mzML export for Bruker timsTOF .d/ (TDF) bundles.

reader

types

Plain data types read from a bundle.