Function varlociraptor::model::evidence::fragments::n_fragment_positions

pub fn n_fragment_positions(
    insert_size: u32, 
    left_read_len: u32, 
    right_read_len: u32, 
    window: u32
) -> u32

Calculate the number of positions a fragment can have in a given window according to Sahlin et al. biorxiv 2015 (http://biorxiv.org/content/biorxiv/early/2015/08/04/023929.full.pdf).

Arguments

• insert_size - observed insert size according to read mapper
• left_read_len - read length of left read
• right_read_len - read length of right read
• window - size of the considered sampling window (total, symmetric around the event)