List of all items
Structs
- fitting::ActionPotentialSummary
- fitting::FittingSettings
- fitting::SummaryScalingDefaults
- fitting::SummaryScalingFactors
- ga::BitString
- ga::GeneticAlgorithmParameters
- graph::AdjacencyList
- graph::AdjacencyMatrix
- graph::ConnectingGraphGPU
- graph::GraphGPU
- graph::GraphPosition
- graph::InterleavingGraphGPU
- interactable::Environment
- interactable::UnsupervisedEnvironment
- neuron::AverageVoltageHistory
- neuron::EEGHistory
- neuron::GridVoltageHistory
- neuron::Lattice
- neuron::LatticeNetwork
- neuron::RewardModulatedLattice
- neuron::RewardModulatedLatticeNetwork
- neuron::SpikeHistory
- neuron::SpikeTrainGridHistory
- neuron::SpikeTrainLattice
- neuron::SpikeTrainSpikeHistory
- neuron::attractors::DiscreteNeuron
- neuron::attractors::DiscreteNeuronLattice
- neuron::gpu_lattices::LatticeGPU
- neuron::gpu_lattices::LatticeNetworkGPU
- neuron::hodgkin_huxley::HodgkinHuxleyNeuron
- neuron::integrate_and_fire::AdaptiveExpLeakyIntegrateAndFireNeuron
- neuron::integrate_and_fire::AdaptiveLeakyIntegrateAndFireNeuron
- neuron::integrate_and_fire::BCMIzhikevichNeuron
- neuron::integrate_and_fire::IzhikevichNeuron
- neuron::integrate_and_fire::LeakyIntegrateAndFireNeuron
- neuron::integrate_and_fire::LeakyIzhikevichNeuron
- neuron::integrate_and_fire::QuadraticIntegrateAndFireNeuron
- neuron::integrate_and_fire::SimpleLeakyIntegrateAndFire
- neuron::intermediate_delegate::NeurotransmittersIntermediate
- neuron::ion_channels::BasicGatingVariable
- neuron::ion_channels::CalciumIonChannel
- neuron::ion_channels::KIonChannel
- neuron::ion_channels::KLeakChannel
- neuron::ion_channels::KSteadyStateChannel
- neuron::ion_channels::LeakChannel
- neuron::ion_channels::NaIonChannel
- neuron::ion_channels::ReducedCalciumChannel
- neuron::iterate_and_spike::AMPAReceptor
- neuron::iterate_and_spike::ApproximateNeurotransmitter
- neuron::iterate_and_spike::ApproximateReceptor
- neuron::iterate_and_spike::DefaultReceptors
- neuron::iterate_and_spike::DestexheNeurotransmitter
- neuron::iterate_and_spike::DestexheReceptor
- neuron::iterate_and_spike::DiscreteSpikeNeurotransmitter
- neuron::iterate_and_spike::ExponentialDecayNeurotransmitter
- neuron::iterate_and_spike::ExponentialDecayReceptor
- neuron::iterate_and_spike::GABAReceptor
- neuron::iterate_and_spike::GaussianParameters
- neuron::iterate_and_spike::Ionotropic
- neuron::iterate_and_spike::KernelFunction
- neuron::iterate_and_spike::NMDAReceptor
- neuron::iterate_and_spike::Neurotransmitters
- neuron::iterate_and_spike::XReceptor
- neuron::morris_lecar::MorrisLecarNeuron
- neuron::plasticity::BCM
- neuron::plasticity::RewardModulatedSTDP
- neuron::plasticity::STDP
- neuron::plasticity::TraceRSTDP
- neuron::spike_train::BCMPoissonNeuron
- neuron::spike_train::DeltaDiracRefractoriness
- neuron::spike_train::ExponentialDecayRefractoriness
- neuron::spike_train::PoissonNeuron
- neuron::spike_train::PresetSpikeTrain
- neuron::spike_train::RateSpikeTrain
Enums
- error::AgentError
- error::GPUError
- error::GeneticAlgorithmError
- error::GraphError
- error::LatticeNetworkError
- error::PatternError
- error::ReceptorNeurotransmitterError
- error::SpikingNeuralNetworksError
- error::TimeSeriesProcessingError
- neuron::RewardModulatedConnection
- neuron::attractors::DiscreteNeuronState
- neuron::iterate_and_spike::AvailableBufferType
- neuron::iterate_and_spike::BufferGPU
- neuron::iterate_and_spike::BufferType
- neuron::iterate_and_spike::DefaultReceptorsNeurotransmitterType
- neuron::iterate_and_spike::DefaultReceptorsType
- neuron::iterate_and_spike::IonotropicNeurotransmitterType
- neuron::iterate_and_spike::IonotropicReceptorNeurotransmitterType
- neuron::iterate_and_spike::IonotropicType
Traits
- graph::ConnectingGraphToGPU
- graph::Graph
- graph::GraphToGPU
- graph::ToGraphPosition
- interactable::Agent
- interactable::State
- interactable::UnsupervisedAgent
- interactable::UnsupervisedState
- neuron::CellGrid
- neuron::InternalGraph
- neuron::LatticeHistory
- neuron::RunLattice
- neuron::RunNetwork
- neuron::RunSpikeTrainLattice
- neuron::SpikeTrainGrid
- neuron::SpikeTrainLatticeHistory
- neuron::gpu_lattices::LatticeHistoryGPU
- neuron::gpu_lattices::SpikeTrainLatticeHistoryGPU
- neuron::ion_channels::IonChannel
- neuron::ion_channels::IonChannelGPU
- neuron::ion_channels::TimestepIndependentIonChannel
- neuron::ion_channels::TimestepIndependentIonChannelGPU
- neuron::iterate_and_spike::CurrentVoltage
- neuron::iterate_and_spike::GapConductance
- neuron::iterate_and_spike::IonotropicReception
- neuron::iterate_and_spike::IsSpiking
- neuron::iterate_and_spike::IterateAndSpike
- neuron::iterate_and_spike::IterateAndSpikeGPU
- neuron::iterate_and_spike::LastFiringTime
- neuron::iterate_and_spike::NeurotransmitterKinetics
- neuron::iterate_and_spike::NeurotransmitterKineticsGPU
- neuron::iterate_and_spike::NeurotransmitterType
- neuron::iterate_and_spike::NeurotransmitterTypeGPU
- neuron::iterate_and_spike::ReceptorKinetics
- neuron::iterate_and_spike::ReceptorKineticsGPU
- neuron::iterate_and_spike::Receptors
- neuron::iterate_and_spike::ReceptorsGPU
- neuron::iterate_and_spike::Timestep
- neuron::plasticity::BCMActivity
- neuron::plasticity::Plasticity
- neuron::plasticity::RewardModulatedWeight
- neuron::plasticity::RewardModulator
- neuron::spike_train::NeuralRefractoriness
- neuron::spike_train::NeuralRefractorinessGPU
- neuron::spike_train::SpikeTrain
- neuron::spike_train::SpikeTrainGPU
Macros
- create_float_buffer
- create_optional_uint_buffer
- create_uint_buffer
- flatten_and_retrieve_field
- neuron::create_agent_type_for_lattice
- neuron::create_agent_type_for_network
- neuron::iterate_and_spike::create_float_buffer
- neuron::iterate_and_spike::create_optional_uint_buffer
- neuron::iterate_and_spike::create_uint_buffer
- neuron::iterate_and_spike::flatten_and_retrieve_field
- neuron::iterate_and_spike::read_and_set_buffer
- neuron::iterate_and_spike::write_buffer
- read_and_set_buffer
- write_buffer
Derive Macros
- neuron::iterate_and_spike_traits::CurrentVoltage
- neuron::iterate_and_spike_traits::IsSpiking
- neuron::iterate_and_spike_traits::IterateAndSpikeBase
- neuron::iterate_and_spike_traits::LastFiringTime
- neuron::iterate_and_spike_traits::SpikeTrainBase
- neuron::iterate_and_spike_traits::Timestep
Functions
- correlation::pearsonr
- distribution::limited_distr
- eeg::get_power_density
- eeg::power_density_comparison
- fitting::compare_summary
- fitting::fit_neuron_to_neuron
- fitting::get_reference_scale
- fitting::get_reference_summary
- fitting::get_summary
- fitting::print_action_potential_summaries
- fitting::scale_summary
- ga::decode
- ga::genetic_algo
- neuron::attractors::distort_pattern
- neuron::attractors::generate_binary_hopfield_network
- neuron::attractors::generate_hopfield_network
- neuron::attractors::generate_random_patterns
- neuron::gap_junction
- neuron::hodgkin_huxley::find_peaks
- neuron::hodgkin_huxley::run_static_input_hodgkin_huxley
- neuron::integrate_and_fire::run_static_input_integrate_and_fire
- neuron::iterate_and_spike::aggregate_neurotransmitter_concentrations
- neuron::iterate_and_spike::generate_unique_prefix
- neuron::iterate_and_spike::weight_neurotransmitter_concentration
- neuron::iterate_coupled_spiking_neurons
- neuron::iterate_coupled_spiking_neurons_and_spike_train
- neuron::spike_train_gap_junction