Module seq_io::fasta[−][src]

Efficient FASTA reading and writing

Structs

OwnedRecord	A FASTA record that ownes its data (requiring two allocations)
Position
Reader	Parser for FASTA files.
RecordSet	Set of FASTA records that owns it's buffer and knows the positions of each record.
RecordSetIter
RecordsIntoIter	Iterator of `OwnedRecord` that owns the underlying reader
RecordsIter	Borrowed iterator of `OwnedRecord`
RefRecord	A FASTA record that borrows data from a buffer.
SeqLines

FASTA record trait implemented by both RefRecord and OwnedRecord

write_head	Writes only the sequence header.
write_id_desc	Writes only the sequence header given ID and description parts.
write_parts	Writes data to the FASTA format. ID and description parts of the header are supplied separately instead of a whole header line.
write_seq	Writes only the sequence line.
write_seq_iter	Writes the sequence line from an iterator (such as `SeqLines`)
write_to	Writes data (not necessarily stored in a `Record` instance) to the FASTA format.
write_wrap	Writes data to the FASTA format. Wraps the sequence to produce multi-line FASTA with a maximum width specified by the `wrap` parameter.
write_wrap_seq	Writes the sequence line, and wraps the output to a maximum width specified by `wrap`.
write_wrap_seq_iter	Writes the sequence line from an iterator (such as `SeqLines`) and wraps the output to a maximum width specified by `wrap`.